RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SORBS1Q9BX66 1292 aaKnown RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 JAM3Q9BX67 310 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 PITHD1Q9GZP4 211 aaPredicted RBP8.26□□□□□ -1.09
TDP1-204ENST00000545686 BTBD1Q9H0C5 482 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 SERHL2Q9H4I8 314 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 B3GAT2Q9NPZ5 323 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ASB6Q9NWX5 421 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 TOR4AQ9NXH8 423 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 ADAM29Q9UKF5 820 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 LTBP2Q14767 1821 aa8.26□□□□□ -1.09
TDP1-204ENST00000545686 CARNS1A5YM72 827 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 M0R3H8 397 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 OR2B3O76000 313 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 SLC1A3P43003 542 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 OR3A3P47888 321 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 TM4SF4P48230 202 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 CCT3P49368 545 aaKnown RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 INPP1P49441 399 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 HSPB3Q12988 150 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 BTBD16Q32M84 506 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 ARSIQ5FYB1 569 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 PRAMEF8Q5VWM4 474 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 PRAMEF7Q5VXH5 474 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 ADIPOR2Q86V24 386 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 NUDT13Q86X67 352 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 KIF18BQ86Y91 864 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 ANKK1Q8NFD2 765 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 OR52N1Q8NH53 320 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 SUN3Q8TAQ9 357 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 SMG7Q92540 1137 aaKnown RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 SNAPC3Q92966 411 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 DTD2Q96FN9 168 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 ZNF558Q96NG5 402 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 MKRN2Q9H000 416 aaKnown RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 ANKRD19PQ9H560 264 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 FOLH1BQ9HBA9 442 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 MED17Q9NVC6 651 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 WDR70Q9NW82 654 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 IL36AQ9UHA7 158 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 CLCA2Q9UQC9 943 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 A0A0X1KG70 313 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 TBX6O95947 436 aaPredicted RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 IGHA1P01876 353 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 CXCL10P02778 98 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 NR2F1P10589 423 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 ERGP11308 486 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 HK1P19367 917 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 ACADLP28330 430 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 VASPP50552 380 aaPredicted RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 TRA2BP62995 288 aaKnown RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 BDH1Q02338 343 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 TSPAN31Q12999 210 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 MRPL28Q13084 256 aaKnown RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 P2RY14Q15391 338 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 TYW3Q6IPR3 259 aaKnown RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 RASSF6Q6ZTQ3 369 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 ZNF765Q7L2R6 523 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 KIAA0907Q7Z7F0 614 aaPredicted RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 TRAPPC5Q8IUR0 188 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 CCDC28AQ8IWP9 274 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 KLHL36Q8N4N3 616 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 NEIL3Q8TAT5 605 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 SUN5Q8TC36 379 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 DNAJA4Q8WW22 397 aaPredicted RBP8.25□□□□□ -1.09
TDP1-204ENST00000545686 OTULINQ96BN8 352 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 COQ10AQ96MF6 247 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 AIF1LQ9BQI0 150 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 WFDC6Q9BQY6 131 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 PINK1Q9BXM7 581 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 TEX12Q9BXU0 123 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 PLA2G12AQ9BZM1 189 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 SAP130Q9H0E3 1048 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 OR51I1Q9H343 314 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.25□□□□□ -1.09
TDP1-204ENST00000545686 MCUBQ9NWR8 336 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 SAGE1Q9NXZ1 904 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 B3GNT2Q9NY97 397 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 NLKQ9UBE8 527 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 CBLCQ9ULV8 474 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 CDH10Q9Y6N8 788 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 COL4A3Q01955 1670 aa8.25□□□□□ -1.09
TDP1-204ENST00000545686 PRAMEF27A3QJZ7 478 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 WASHC1A8K0Z3 465 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 NEDD8-MDP1E9PL57 170 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 SYT5O00445 386 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 GABRPO00591 440 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 EFCAB14O75071 495 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 ALDH1A1P00352 501 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 OR12D1P0DN82 309 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 M6PRP20645 277 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 KELP23276 732 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 HOXD10P28358 340 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 NNMTP40261 264 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 SLC6A11P48066 632 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 ATP12AP54707 1039 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 RIPPLY1Q0D2K3 151 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 IKZF1Q13422 519 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 ARHGAP19Q14CB8 494 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 SYPL1Q16563 259 aa8.24□□□□□ -1.09
TDP1-204ENST00000545686 HACD4Q5VWC8 232 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms