RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 E2F2Q14209 437 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 TGFBIQ15582 683 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 ETFDHQ16134 617 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 EXOC3L2Q2M3D2 409 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 SPANXN3Q5MJ09 141 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 DEPDC1Q5TB30 811 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 KHDRBS2Q5VWX1 349 aaKnown RBP8.46□□□□□ -1.06
CHD4-212ENST00000545083 OR2A2Q6IF42 318 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 SLC30A6Q6NXT4 461 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 AAGABQ6PD74 315 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 ADAMTSL2Q86TH1 951 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 WFDC8Q8IUA0 241 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 UBQLNLQ8IYU4 475 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 NKAPQ8N5F7 415 aaKnown RBP8.46□□□□□ -1.06
CHD4-212ENST00000545083 RNF10Q8N5U6 811 aaKnown RBP8.46□□□□□ -1.06
CHD4-212ENST00000545083 RAB3IL1Q8TBN0 382 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 MAIP1Q8WWC4 291 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 NEUROG1Q92886 237 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 CAPS2Q9BXY5 557 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 ZNF717Q9BY31 904 aaPredicted RBP8.46□□□□□ -1.06
CHD4-212ENST00000545083 OR10A5Q9H207 317 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 TSPY26PQ9H489 355 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 MS4A12Q9NXJ0 267 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 EHD3Q9NZN3 535 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 KLRF1Q9NZS2 232 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 PHF11Q9UIL8 331 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 CDC42EP3Q9UKI2 254 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 CORO1CQ9ULV4 474 aaPredicted RBP8.46□□□□□ -1.06
CHD4-212ENST00000545083 GUCA1BQ9UMX6 200 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 ASB4Q9Y574 426 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 MAGED1Q9Y5V3 778 aaPredicted RBP8.46□□□□□ -1.06
CHD4-212ENST00000545083 PSAT1Q9Y617 370 aa8.46□□□□□ -1.06
CHD4-212ENST00000545083 PRAMEF25A6NGN4 478 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 TMPRSS11DO60235 418 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 ZIC3O60481 467 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 EEDO75530 441 aaKnown RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 STK16O75716 305 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 DANCRP0C864 163 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 NAGAP17050 411 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 KRT15P19012 456 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 S1PR1P21453 382 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 SRD5A2P31213 254 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 TLX1P31314 330 aaPredicted RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 SUCLG1P53597 346 aaKnown RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 IRF8Q02556 426 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 LAPTM5Q13571 262 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 GUSBP1Q15486 140 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 TBCCQ15814 346 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 PDK4Q16654 411 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 HIST2H2ACQ16777 129 aaPredicted RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 PAGE2BQ5JRK9 111 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 HIST2H2AA3Q6FI13 130 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 OR5M10Q6IEU7 315 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 MRM1Q6IN84 353 aaKnown RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 NUP54Q7Z3B4 507 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 PLCZ1Q86YW0 608 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 GALNT12Q8IXK2 581 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 LAS2Q8IYD9 372 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 ZCCHC7Q8N3Z6 543 aaKnown RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 SPATA6LQ8N4H0 392 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 OR7G3Q8NG95 312 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 OMA1Q96E52 524 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 CMTM7Q96FZ5 175 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 BAG1Q99933 345 aaPredicted RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 AMBRA1Q9C0C7 1298 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 RNF122Q9H9V4 155 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 PPANQ9NQ55 473 aaKnown RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 GDF2Q9UK05 429 aaPredicted RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 PTBP2Q9UKA9 531 aaKnown RBP8.45□□□□□ -1.06
CHD4-212ENST00000545083 PROCRQ9UNN8 238 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 TENM1Q9UKZ4 2725 aa8.45□□□□□ -1.06
CHD4-212ENST00000545083 CADP27708 2225 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 IGHV4-30-2A0A087WSY4 118 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 A0A0A6YYD5 115 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 FAM95CA0A1B0GW59 222 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 PGRMC2O15173 223 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 CCNT2O60583 730 aaKnown RBP8.44□□□□□ -1.06
CHD4-212ENST00000545083 TTC4O95801 387 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 NR2F6P10588 404 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 CXCR5P32302 372 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 BSGP35613 385 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 BUD31P41223 144 aaPredicted RBP8.44□□□□□ -1.06
CHD4-212ENST00000545083 HMGCS1Q01581 520 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 ZNF844Q08AG5 666 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 PLCXD2Q0VAA5 305 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 SNTA1Q13424 505 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 DDX39BQ13838 428 aaKnown RBP8.44□□□□□ -1.06
CHD4-212ENST00000545083 BCL2A1Q16548 175 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 TMEM249Q2WGJ8 235 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 RNASEH2BQ5TBB1 312 aaKnown RBP8.44□□□□□ -1.06
CHD4-212ENST00000545083 STAC2Q6ZMT1 411 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 ZC3HC1Q86WB0 502 aaKnown RBP8.44□□□□□ -1.06
CHD4-212ENST00000545083 GPSM1Q86YR5 675 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 TXLNBQ8N3L3 684 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 ARIH2OSQ8N7S6 290 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 C17orf47Q8NEP4 570 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 FNDC9Q8TBE3 224 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 ROBO4Q8WZ75 1007 aa8.44□□□□□ -1.06
CHD4-212ENST00000545083 GTPBP3Q969Y2 492 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms