RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 CSNK2A2P19784 350 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 NT5EP21589 574 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SERPINB3P29508 390 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 ALDH3A1P30838 453 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 TIA1P31483 386 aaKnown RBP eCLIP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SOX3P41225 446 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 ALDH9A1P49189 494 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 TDGF1P3P51864 188 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 FOXA1P55317 472 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 PMP22Q01453 160 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 HMGCS1Q01581 520 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 PCLAFQ15004 111 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 KRTCAP3Q53RY4 240 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 PIGGQ5H8A4 983 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 HLA-DQA1Q5Y7H0 255 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 GALNT18Q6P9A2 607 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SCIMPQ6UWF3 145 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CLEC18BQ6UXF7 455 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 DGAT2L6Q6ZPD8 337 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 JAZF1Q86VZ6 243 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 DND1Q8IYX4 353 aaKnown RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SAMD14Q8IZD0 417 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SLC15A4Q8N697 577 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 POGLUT1Q8NBL1 392 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CLEC18CQ8NCF0 446 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 FAM76AQ8TAV0 307 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 UCN3Q969E3 161 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 KLHL29Q96CT2 875 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 APIPQ96GX9 242 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 METTL2AQ96IZ6 378 aaKnown RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SGCZQ96LD1 299 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 GATA5Q9BWX5 397 aaPredicted RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 HES7Q9BYE0 225 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SHCBP1LQ9BZQ2 653 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CENPHQ9H3R5 247 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 C7orf69Q9H7B7 122 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CXorf21Q9HAI6 301 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 PFDN4Q9NQP4 134 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 GIMAP4Q9NUV9 329 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SLC17A7Q9P2U7 560 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SEC14L3Q9UDX4 400 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 UTS2RQ9UKP6 389 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CES1P1Q9UKY3 287 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 OSGIN2Q9Y236 505 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 CFL2Q9Y281 166 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 SLC5A6Q9Y289 635 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 DLGAP4Q9Y2H0 992 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 WBP11Q9Y2W2 641 aaKnown RBP6.82□□□□□ -1.32
CPSF7-224ENST00000544990 EML6Q6ZMW3 1958 aa6.82□□□□□ -1.32
CPSF7-224ENST00000544990 MYO18BQ8IUG5 2567 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 A0A1B0GUH1 482 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 C2orf92A0A1B0GVN3 265 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CAPN14A8MX76 684 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 HRKO00198 91 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 GSC2O15499 205 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 PEX1O43933 1283 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 SEC22BO75396 215 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 BCAS2O75934 225 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 RSL1D1O76021 490 aaKnown RBP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 OR6B1O95007 311 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 UNC5CO95185 931 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CBX7O95931 251 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 P04436 131 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ATP1B1P05026 303 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 FGF4P08620 206 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 IL3P08700 152 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 NEFHP12036 1026 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF24P17028 368 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CNR1P21554 472 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 MST1P26927 711 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 SERPINB5P36952 375 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 FEN1P39748 380 aaKnown RBP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 KIR3DL1P43629 444 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 MEOX1P50221 254 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CASP6P55212 293 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 PER3P56645 1201 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 SLC37A1P57057 533 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 RAE1P78406 368 aaKnown RBP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 SRSF1Q07955 248 aaKnown RBP eCLIP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF844Q08AG5 666 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF763Q0D2J5 394 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 C2orf80Q0P641 193 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 FUT7Q11130 342 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 MAP4K2Q12851 820 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF750Q32MQ0 723 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CEP85LQ5SZL2 805 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CLEC6AQ6EIG7 209 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 C16orf47Q6ZP98 133 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 RTL4Q6ZR62 310 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 MDGA2Q7Z553 956 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ZAR1Q86SH2 424 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 ZNF227Q86WZ6 799 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 NUDCD3Q8IVD9 361 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 C9orf40Q8IXQ3 194 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CLYBLQ8N0X4 340 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 TAGAPQ8N103 731 aa6.81□□□□□ -1.32
CPSF7-224ENST00000544990 LRRC25Q8N386 305 aaPredicted RBP6.81□□□□□ -1.32
CPSF7-224ENST00000544990 CPSF7Q8N684 471 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms