RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 SSTR4P31391 388 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 XCR1P46094 333 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 GSTM5P46439 218 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 KHKP50053 298 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 DUSP8Q13202 625 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 PRTGQ2VWP7 1150 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 HLA-BQ31612 363 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 FGD3Q5JSP0 725 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 TMEM236Q5W0B7 351 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 KDM4DQ6B0I6 523 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 TCTN3Q6NUS6 607 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 KLHL35Q6PF15 583 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 SHISA6Q6ZSJ9 500 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 PIWIL3Q7Z3Z3 882 aaKnown RBP12.8□□□□□ -0.36
HCFC2-202ENST00000544223 PATL1Q86TB9 770 aaKnown RBP12.8□□□□□ -0.36
HCFC2-202ENST00000544223 CCDC71Q8IV32 467 aaPredicted RBP12.8□□□□□ -0.36
HCFC2-202ENST00000544223 RBM12BQ8IXT5 1001 aaKnown RBP12.8□□□□□ -0.36
HCFC2-202ENST00000544223 CLIP4Q8N3C7 705 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 SDR16C5Q8N3Y7 309 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 OR4N2Q8NGD1 307 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 OR6T1Q8NGN1 323 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 FAM174AQ8TBP5 190 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 CCDC74AQ96AQ1 378 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 TCTN2Q96GX1 697 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 ING2Q9H160 280 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 SLC38A1Q9H2H9 487 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF696Q9H7X3 374 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 CHST2Q9Y4C5 530 aa12.8□□□□□ -0.36
HCFC2-202ENST00000544223 LILRA5A6NI73 299 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 LAMTOR5O43504 91 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PCDHGA12O60330 932 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 GPR75O95800 540 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 IFNW1P05000 195 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ACP2P11117 423 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 CD1CP29017 333 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 AVPR1BP47901 424 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PGDP52209 483 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 CD47Q08722 323 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 GPR68Q15743 365 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF628Q5EBL2 1059 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PERM1Q5SV97 790 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 C16orf62Q7Z3J2 963 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ZAR1Q86SH2 424 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 C11orf74Q86VG3 221 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 LGI4Q8N135 537 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ADAMTS15Q8TE58 950 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PROX1Q92786 737 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF764Q96H86 408 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PCED1AQ9H1Q7 454 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 C3orf14Q9HBI5 128 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PDE7BQ9NP56 450 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 GXYLT2A0PJZ3 443 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 A8MUA0 341 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 BCAS1O75363 584 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF10P21506 573 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 FMO3P31513 532 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 KCNJ5P48544 419 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ARHGDIAP52565 204 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PLK5Q496M5 336 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PMS2CLQ68D20 193 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 TMEM105Q8N8V8 129 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PIK3C3Q8NEB9 887 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 OR56A1Q8NGH5 318 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 ATOH1Q92858 354 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 THAP11Q96EK4 314 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PIP5K1AQ99755 562 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 NMNAT1Q9HAN9 279 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 CLK4Q9HAZ1 481 aaKnown RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 LYRM4Q9HD34 91 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 MAT2BQ9NZL9 334 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 PDP2Q9P2J9 529 aa12.79□□□□□ -0.36
HCFC2-202ENST00000544223 GPC6Q9Y625 555 aaPredicted RBP12.79□□□□□ -0.36
HCFC2-202ENST00000544223 TLCD2A6NGC4 264 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 A8MVJ9 347 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 PTGES3LE9PB15 166 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 PEX12O00623 359 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 BCKDKO14874 412 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 GADD45GO95257 159 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 GASTP01350 101 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 TDGF1P13385 188 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 EEF1B2P24534 225 aaKnown RBP12.78□□□□□ -0.36
HCFC2-202ENST00000544223 EFNA3P52797 238 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 CRISP3P54108 245 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 IL5RAQ01344 420 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 MGAT2Q10469 447 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 PRICKLE4Q2TBC4 344 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 LIN52Q52LA3 116 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 MFSD4BQ5TF39 518 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 TMEM64Q6YI46 380 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 NATD1Q8N6N6 113 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 ZNF555Q8NEP9 628 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 OR10G2Q8NGC3 310 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 OR1L3Q8NH93 324 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 DNAAF2Q9NVR5 837 aaKnown RBP12.78□□□□□ -0.36
HCFC2-202ENST00000544223 USE1Q9NZ43 259 aa12.78□□□□□ -0.36
HCFC2-202ENST00000544223 IFT80Q9P2H3 777 aaPredicted RBP12.78□□□□□ -0.36
HCFC2-202ENST00000544223 FAM32AQ9Y421 112 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms