RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 TRIM3O75382 744 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 SEC22BO75396 215 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 TOXO94900 526 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 EPPINO95925 133 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 CHEK2O96017 543 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ACTL6AO96019 429 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 CLPSP04118 112 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 HPNP05981 417 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ABCB1P08183 1280 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 IL3P08700 152 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 FAM153BP0C7A2 387 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 S1PR1P21453 382 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 MSX1P28360 303 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 GCAP28676 217 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 IL12BP29460 328 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 PNLIPRP2P54317 469 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 LCP2Q13094 533 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 EFR3AQ14156 821 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ZNHIT3Q15649 155 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 SLC25A35Q3KQZ1 300 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 FAM153CQ494X1 144 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 TRMT12Q53H54 448 aaKnown RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 TMEM81Q6P7N7 255 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ANGPTL8Q6UXH0 198 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 CHMP1BQ7LBR1 199 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 WDR53Q7Z5U6 358 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 TMEM200AQ86VY9 491 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 LACC1Q8IV20 430 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 DMRTC2Q8IXT2 367 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 ULK2Q8IYT8 1036 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 FAM9CQ8IZT9 166 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ZNF295-AS1Q8N0V1 137 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 RPRMLQ8N4K4 120 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ZNF441Q8N8Z8 693 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 EIF1ADQ8N9N8 165 aaKnown RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 OR52R1Q8NGF1 315 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 RDH11Q8TC12 318 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 C16orf78Q8WTQ4 265 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.56□□□□□ -1.36
NUP43-206ENST00000543637 ABTB1Q969K4 478 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 EXOSC8Q96B26 276 aaKnown RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 ERP27Q96DN0 273 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 OMA1Q96E52 524 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 TMEM237Q96Q45 408 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 TRIB1Q96RU8 372 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 HBEGFQ99075 208 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 OSBPL11Q9BXB4 747 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 TRIM8Q9BZR9 551 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 STMN4Q9H169 189 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 NXF5Q9H1B4 397 aaKnown RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 SLC6A15Q9H2J7 730 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ZNF703Q9H7S9 590 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 PROK2Q9HC23 129 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 MIEF1Q9NQG6 463 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 SLC35C2Q9NQQ7 365 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 SDHAF3Q9NRP4 125 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 KCNN3Q9UGI6 736 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 ZNF639Q9UID6 485 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 FOXD3Q9UJU5 478 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 EXO1Q9UQ84 846 aaKnown RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 WBP11Q9Y2W2 641 aaKnown RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 OR10H1Q9Y4A9 318 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 RP1L1Q8IWN7 2480 aaPredicted RBP6.56□□□□□ -1.36
NUP43-206ENST00000543637 ZNF407Q9C0G0 2248 aa6.56□□□□□ -1.36
NUP43-206ENST00000543637 FLNBO75369 2602 aaKnown RBP6.55□□□□□ -1.36
NUP43-206ENST00000543637 A0A0G2JNJ9 132 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 A0A1B0GTL3 188 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 A0A1W2PS29 197 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 TLDC2A0PJX2 215 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 C2orf72A6NCS6 295 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 FRG2CA6NGY1 282 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 SMIM23A6NLE4 172 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 SLC28A1O00337 649 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 RGS14O43566 566 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 COQ9O75208 318 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 ERN1O75460 977 aaKnown RBP6.55□□□□□ -1.36
NUP43-206ENST00000543637 SLITRK5O94991 958 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 ZWINTO95229 277 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 UROSP10746 265 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 CYP4B1P13584 511 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 CPA3P15088 417 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 NTSP30990 170 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 TIA1P31483 386 aaKnown RBP eCLIP6.55□□□□□ -1.36
NUP43-206ENST00000543637 UQCRC1P31930 480 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 CRHR1P34998 444 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 TIMP3P35625 211 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 CDK9P50750 372 aaKnown RBP6.55□□□□□ -1.36
NUP43-206ENST00000543637 NAGLUP54802 743 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 PSMD4P55036 377 aaKnown RBP6.55□□□□□ -1.36
NUP43-206ENST00000543637 HMGCS1Q01581 520 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 ZNF763Q0D2J5 394 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 MGAT2Q10469 447 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 NNATQ16517 81 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 WIPI1Q5MNZ9 446 aaPredicted RBP6.55□□□□□ -1.36
NUP43-206ENST00000543637 TCHHL1Q5QJ38 904 aaPredicted RBP6.55□□□□□ -1.36
NUP43-206ENST00000543637 FBXW10Q5XX13 1052 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 TIGD3Q6B0B8 471 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 VASNQ6EMK4 673 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 RTL6Q6ICC9 239 aa6.55□□□□□ -1.36
NUP43-206ENST00000543637 FAM180BQ6P0A1 224 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms