RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 KLRB1Q12918 225 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MLC1Q15049 377 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 EBPQ15125 230 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 MAPRE2Q15555 327 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MPEG1Q2M385 716 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MMEL1Q495T6 779 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 VPS26BQ4G0F5 336 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 H3F3CQ6NXT2 135 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 DNAJC14Q6Y2X3 702 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 GK5Q6ZS86 529 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ZNF621Q6ZSS3 439 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CAMKMTQ7Z624 323 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 SLC44A2Q8IWA5 706 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 PRR22Q8IZ63 422 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 LGI4Q8N135 537 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CYP4Z2PQ8N1L4 340 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ZNF615Q8N8J6 731 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 FAM98AQ8NCA5 519 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 SIMC1Q8NDZ2 872 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 FAM13CQ8NE31 585 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 OR56A1Q8NGH5 318 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 OR5M3Q8NGP4 307 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 OR9I1Q8NGQ6 314 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 NUBPLQ8TB37 319 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 FBXO30Q8TB52 745 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 GPR151Q8TDV0 419 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 STON2Q8WXE9 905 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 SLC39A7Q92504 469 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 PSMF1Q92530 271 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 TP53INP1Q96A56 240 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 VPS33AQ96AX1 596 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CTHRC1Q96CG8 243 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 SPDL1Q96EA4 605 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ITCHQ96J02 903 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 LCORQ96JN0 433 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 SLC35G5Q96KT7 338 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 TEX37Q96LM6 180 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MS4A4EQ96PG1 132 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 RASL10BQ96S79 203 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 YIPF4Q9BSR8 244 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 CXorf36Q9H7Y0 433 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ZBTB20Q9HC78 741 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 Q9N2J8 555 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 KLHL1Q9NR64 748 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 SDR39U1Q9NRG7 319 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 LUZP4Q9P127 313 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 ZNF639Q9UID6 485 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 BTNL2Q9UIR0 455 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MRTO4Q9UKD2 239 aaKnown RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 ADAM21Q9UKJ8 722 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 VPS4AQ9UN37 437 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 FAF1Q9UNN5 650 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 C19orf53Q9UNZ5 99 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 ANKRD11Q6UB99 2663 aaPredicted RBP5.85□□□□□ -1.47
LTBR-212ENST00000543542 CPAMD8Q8IZJ3 1885 aa5.85□□□□□ -1.47
LTBR-212ENST00000543542 MAP1BP46821 2468 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 TRAV17A0A0B4J275 112 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 FRG2CA6NGY1 282 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 TTC36A6NLP5 189 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 TP53I11O14683 189 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 HS6ST1O60243 411 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 NME6O75414 186 aaPredicted RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 REM1O75628 298 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 OR6B1O95007 311 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 KCNH1O95259 989 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 PDGFAP04085 211 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CLPSP04118 112 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 P04436 131 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 GSNP06396 782 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 SNRPB2P08579 225 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 S1PR1P21453 382 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 MATN1P21941 496 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 UQCRC2P22695 453 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 GABRA3P34903 492 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CD96P40200 585 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 SOX3P41225 446 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 FRKP42685 505 aaPredicted RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 PPICP45877 212 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 EMDP50402 254 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 HLCSP50747 726 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 ANXA11P50995 505 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 WNT3P56703 355 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 CORO7P57737 925 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 HBA1P69905 142 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 RPP38P78345 283 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 TUBA3CQ13748 450 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 UBAP2LQ14157 1087 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 LASP1Q14847 261 aaKnown RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 ZNF169Q14929 603 aaPredicted RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 TLR1Q15399 786 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 OR1C1Q15619 314 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 NADK2Q4G0N4 442 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 PIGGQ5H8A4 983 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 COLEC12Q5KU26 742 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 FHL5Q5TD97 284 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 GKAP1Q5VSY0 366 aaPredicted RBP5.84□□□□□ -1.47
LTBR-212ENST00000543542 TUBA3EQ6PEY2 450 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 SLC2A7Q6PXP3 512 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 TMEM64Q6YI46 380 aa5.84□□□□□ -1.47
LTBR-212ENST00000543542 MSANTD1Q6ZTZ1 278 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms