RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 LRP5O75197 1615 aa18.42■□□□□ 0.54
SUDS3-204ENST00000543473 ZBTB42B2RXF5 422 aa18.42■□□□□ 0.54
SUDS3-204ENST00000543473 AXIN1O15169 862 aa18.42■□□□□ 0.54
SUDS3-204ENST00000543473 CHP2O43745 196 aa18.42■□□□□ 0.54
SUDS3-204ENST00000543473 GPR37L1O60883 481 aa18.42■□□□□ 0.54
SUDS3-204ENST00000543473 METTL2BQ6P1Q9 378 aaKnown RBP18.42■□□□□ 0.54
SUDS3-204ENST00000543473 RAD9AQ99638 391 aa18.42■□□□□ 0.54
SUDS3-204ENST00000543473 TAPBPLQ9BX59 468 aa18.42■□□□□ 0.54
SUDS3-204ENST00000543473 CTBP2P56545 445 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 SLC46A3Q7Z3Q1 461 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 MDGA1Q8NFP4 955 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 C16orf78Q8WTQ4 265 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 EDARQ9UNE0 448 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 SIPA1L3O60292 1781 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 IFNA21P01568 189 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 COL28A1Q2UY09 1125 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 IRAK1BP1Q5VVH5 260 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 TMPRSS12Q86WS5 348 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 NT5DC2Q9H857 520 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 EIF3FO00303 357 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 E2F3O00716 465 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 NUPL2O15504 423 aaKnown RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 ADH5P11766 374 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 STK19P49842 368 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 ZNF33BQ06732 778 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 PDGFRLQ15198 375 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 PLBD1Q6P4A8 553 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 SLC22A15Q8IZD6 547 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 BEST3Q8N1M1 668 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 FAM46AQ96IP4 442 aaKnown RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 IL26Q9NPH9 171 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 TEX10Q9NXF1 929 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 NUBP2Q9Y5Y2 271 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 ARHGAP33O14559 1287 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 HPGDSO60760 199 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 TFP02787 698 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 PVALBP20472 110 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 UGT2B10P36537 528 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 GDI2P50395 445 aaKnown RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 LRRC26Q2I0M4 334 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 RPS26P11Q5JNZ5 115 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 FAM180BQ6P0A1 224 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 Q6ZSR9 355 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 NUP54Q7Z3B4 507 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 OR7G3Q8NG95 312 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 SLCO4A1Q96BD0 722 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 THSD1Q9NS62 852 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 RABL2AQ9UBK7 228 aaPredicted RBP18.41■□□□□ 0.54
SUDS3-204ENST00000543473 PSORS1C1Q9UIG5 152 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 LAMP5Q9UJQ1 280 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 RABL2BQ9UNT1 228 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 TMEM98Q9Y2Y6 226 aa18.41■□□□□ 0.54
SUDS3-204ENST00000543473 A6NL46 340 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ANKRD28O15084 1053 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 AGTR1P30556 359 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 GDI1P31150 447 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 GRK5P34947 590 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ZNF140P52738 457 aaPredicted RBP18.4■□□□□ 0.54
SUDS3-204ENST00000543473 FXYD6P3P58550 94 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 RPL13AP3Q6NVV1 102 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 MRPL10Q7Z7H8 261 aaKnown RBP18.4■□□□□ 0.54
SUDS3-204ENST00000543473 CELF5Q8N6W0 485 aaKnown RBP18.4■□□□□ 0.54
SUDS3-204ENST00000543473 TESCQ96BS2 214 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 CPPED1Q9BRF8 314 aaPredicted RBP18.4■□□□□ 0.54
SUDS3-204ENST00000543473 IL20RAQ9UHF4 553 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ARPC4-TTLL3A0A0A6YYG9 625 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 METTL15A6NJ78 407 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ARPC5O15511 151 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 CYB5AP00167 134 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 PTHP01270 115 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 TYRP14679 529 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 RPL35P42766 123 aaKnown RBP18.4■□□□□ 0.54
SUDS3-204ENST00000543473 UGT3A2Q3SY77 523 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 GPR135Q8IZ08 494 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 OR52P1PQ8NH57 321 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 THRSPQ92748 146 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 FKBP10Q96AY3 582 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 CROCCQ5TZA2 2017 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ANKRD34BA5PLL1 514 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 STC2O76061 302 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 OAZ2O95190 189 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 GRIN2CQ14957 1233 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 LY6G5CQ5SRR4 150 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ELP2Q6IA86 826 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.4■□□□□ 0.54
SUDS3-204ENST00000543473 NUP43Q8NFH3 380 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 OR2T11Q8NH01 316 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ARRDC2Q8TBH0 407 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 C7orf34Q96L11 122 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 TNRC6CQ9HCJ0 1690 aaKnown RBP18.4■□□□□ 0.54
SUDS3-204ENST00000543473 CPNE6O95741 557 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 SLC16A8O95907 504 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 ZNF20P17024 532 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 UNC5DQ6UXZ4 953 aa18.4■□□□□ 0.54
SUDS3-204ENST00000543473 LEFTY2O00292 366 aa18.39■□□□□ 0.54
SUDS3-204ENST00000543473 LBX1P52954 281 aa18.39■□□□□ 0.54
SUDS3-204ENST00000543473 MLLT11Q13015 90 aaPredicted RBP18.39■□□□□ 0.54
SUDS3-204ENST00000543473 GRHL2Q6ISB3 625 aa18.39■□□□□ 0.54
SUDS3-204ENST00000543473 ABHD13Q7L211 337 aa18.39■□□□□ 0.54
SUDS3-204ENST00000543473 LAX1Q8IWV1 398 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms