RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 MFFQ9GZY8 342 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 EVA1AQ9H8M9 152 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 C14orf119Q9NWQ9 140 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 STRAPQ9Y3F4 350 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 N4BP2Q86UW6 1770 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 NPIPA5A0A0B4J1W7 369 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ZCWPW2A0A1B0GU75 182 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SRFP11831 508 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 XRCC1P18887 633 aaPredicted RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GSK3AP49840 483 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ARHGDIBP52566 201 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CDH11P55287 796 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GPR85P60893 370 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 MXD1Q05195 221 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PPP1R8Q12972 351 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 KIAA1211LQ6NV74 962 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 P2RY8Q86VZ1 359 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CARM1Q86X55 608 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 KIF18BQ86Y91 864 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF101Q8IZC7 436 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 OR52P1PQ8NH57 321 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 OSTF1Q92882 214 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 DIRAS2Q96HU8 199 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 HOXD1Q9GZZ0 328 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CWH43Q9H720 699 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 MARCH7Q9H992 704 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ENAMQ9NRM1 1142 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 MBD2Q9UBB5 411 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 A0A1B0GVI7 797 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 A0A1B0GVT2 93 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SERTM1A2A2V5 107 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 H0YJX3 145 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PLOD2O00469 737 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 AURKAO14965 403 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 VILLO15195 856 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 AIREO43918 545 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF28P17035 718 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 HK1P19367 917 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ID4P47928 161 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 NR0B1P51843 470 aaKnown RBP6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SSTP61278 116 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ADAM8P78325 824 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SGCAQ16586 387 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PPP1R3AQ16821 1122 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 PAMR1Q6UXH9 720 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SHISA6Q6ZSJ9 500 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 ISCA2Q86U28 154 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 GPR150Q8NGU9 434 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 HS6ST2Q96MM7 605 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CCDC106Q9BWC9 280 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 COQ10BQ9H8M1 238 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 MEAF6Q9HAF1 191 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 EBF2Q9HAK2 575 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 LHX3Q9UBR4 397 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC7A8Q9UHI5 535 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 OAZ3Q9UMX2 235 aa6.56□□□□□ -1.36
SRGAP1-206ENST00000543397 CEP290O15078 2479 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 C2orf92A0A1B0GVN3 265 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 GJE1A6NN92 205 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 C17orf105B2RV13 164 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SOX14O95416 240 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 IGHEP01854 428 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 KLKB1P03952 638 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 EDNRAP25101 427 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 CD27P26842 260 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 OR3A3P47888 321 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 OR3A2P47893 321 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC9A3P48764 834 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SRYQ05066 204 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MRPL58Q14197 206 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC5A9Q2M3M2 681 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PKDCCQ504Y2 493 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 OLFML2AQ68BL7 652 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TLDC1Q6P9B6 456 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SLCO6A1Q86UG4 719 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PTRH1Q86Y79 214 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 MEIOBQ8N635 442 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 OR7G3Q8NG95 312 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TMBIM1Q969X1 311 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 GAL3ST3Q96A11 431 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SFXN2Q96NB2 322 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TM9SF2Q99805 663 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 BEX2Q9BXY8 128 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ULBP3Q9BZM4 244 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 GPN2Q9H9Y4 310 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 NSG1A0A0A6YYJ2 146 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 UGDHO60701 494 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 TNFRSF21O75509 655 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PIAS2O75928 621 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ITGA5P08648 1049 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 CKMT2P17540 419 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 AOC1P19801 751 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 PRLHRP49683 370 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ACADVLP49748 655 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF140P52738 457 aaPredicted RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 AP3S2P59780 193 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 UBE2NP61088 152 aaKnown RBP6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 ZNF33BQ06732 778 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 SLC35F1Q5T1Q4 408 aa6.55□□□□□ -1.36
SRGAP1-206ENST00000543397 RBM44Q6ZP01 1051 aaKnown RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms