RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 TO15178 435 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 TGDSO95455 350 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 CRYABP02511 175 aaKnown RBP16.97■□□□□ 0.31
COPS7A-216ENST00000543170 DRD5P21918 477 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 EPHA3P29320 983 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 PPICP45877 212 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 NTRK2Q16620 822 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 MAPKAPK3Q16644 382 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 DPY19L1Q2PZI1 675 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 CPTPQ5TA50 214 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 ZNF324BQ6AW86 544 aaPredicted RBP16.97■□□□□ 0.31
COPS7A-216ENST00000543170 TMEM107Q6UX40 140 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 MDGA2Q7Z553 956 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 KRTCAP2Q8N6L1 136 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 POGLUT1Q8NBL1 392 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 GALNT11Q8NCW6 608 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 SIMC1Q8NDZ2 872 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 OR7A2PQ8NGA2 310 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 ELP4Q96EB1 424 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 LCORQ96JN0 433 aaPredicted RBP16.97■□□□□ 0.31
COPS7A-216ENST00000543170 VSTM2LQ96N03 204 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 BHLHE41Q9C0J9 482 aaPredicted RBP16.97■□□□□ 0.31
COPS7A-216ENST00000543170 NXF5Q9H1B4 397 aaKnown RBP16.97■□□□□ 0.31
COPS7A-216ENST00000543170 SH2D2AQ9NP31 389 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 DDX18Q9NVP1 670 aaKnown RBP16.97■□□□□ 0.31
COPS7A-216ENST00000543170 AIG1Q9NVV5 245 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 USH1CQ9Y6N9 552 aa16.97■□□□□ 0.31
COPS7A-216ENST00000543170 KLRC4-KLRK1H3BQV0 150 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 UPK1AO00322 258 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 ANKRD28O15084 1053 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 ALDOCP09972 364 aaKnown RBP16.96■□□□□ 0.31
COPS7A-216ENST00000543170 LAMP1P11279 417 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 NAGAP17050 411 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 CLNS1AP54105 237 aaKnown RBP16.96■□□□□ 0.31
COPS7A-216ENST00000543170 MANFP55145 182 aaKnown RBP16.96■□□□□ 0.31
COPS7A-216ENST00000543170 HSPB3Q12988 150 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 ZNF551Q7Z340 670 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-216ENST00000543170 ATCAYQ86WG3 371 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 PSMA8Q8TAA3 256 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 PAQR8Q8TEZ7 354 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 NR4A3Q92570 626 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 TESCQ96BS2 214 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 FRMD6Q96NE9 622 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 SLX1AQ9BQ83 275 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 DPY30Q9C005 99 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 WDR55Q9H6Y2 383 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-216ENST00000543170 FOLH1BQ9HBA9 442 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 NEUROD4Q9HD90 331 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 OLAHQ9NV23 265 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 NTMQ9P121 344 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 MAP10Q9P2G4 905 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 GPR55Q9Y2T6 319 aaPredicted RBP16.96■□□□□ 0.31
COPS7A-216ENST00000543170 NPFFR2Q9Y5X5 522 aa16.96■□□□□ 0.31
COPS7A-216ENST00000543170 TTC36A6NLP5 189 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 ERN1O75460 977 aaKnown RBP16.95■□□□□ 0.3
COPS7A-216ENST00000543170 ABCD3P28288 659 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 GPC1P35052 558 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 RPS6KA2Q15349 733 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 SLC9B1Q4ZJI4 515 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 EPGNQ6UW88 154 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 OR8J2Q8NGG1 315 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 CEP70Q8NHQ1 597 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 STON2Q8WXE9 905 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 SECISBP2Q96T21 854 aaKnown RBP16.95■□□□□ 0.3
COPS7A-216ENST00000543170 DUSP26Q9BV47 211 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 ANKRA2Q9H9E1 313 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 SACM1LQ9NTJ5 587 aa16.95■□□□□ 0.3
COPS7A-216ENST00000543170 PRRC2CQ9Y520 2896 aaKnown RBP16.95■□□□□ 0.3
COPS7A-216ENST00000543170 HELZ2Q9BYK8 2649 aaKnown RBP16.94■□□□□ 0.3
COPS7A-216ENST00000543170 GOLGA8QA0A0J9YX86 632 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 A0A1W2PRB8 838 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 GOLGA8OA6NCC3 632 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 TCP11X1B4DZS4 312 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 GOLGA8NF8WBI6 632 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 PEX1O43933 1283 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 CT45A8P0DMV1 189 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 CT45A9P0DMV2 189 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 EDN3P14138 238 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 IDO1P14902 403 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 CDK9P50750 372 aaKnown RBP16.94■□□□□ 0.3
COPS7A-216ENST00000543170 TDGF1P3P51864 188 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 SRSF11Q05519 484 aaKnown RBP16.94■□□□□ 0.3
COPS7A-216ENST00000543170 ZNF155Q12901 538 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-216ENST00000543170 CT45A2Q5DJT8 189 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 TMEM64Q6YI46 380 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 SULF2Q8IWU5 870 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 FBXW8Q8N3Y1 598 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 ZFP62Q8NB50 900 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-216ENST00000543170 ST6GALNAC3Q8NDV1 305 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 OR5P2Q8WZ92 322 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 HOXB13Q92826 284 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-216ENST00000543170 CLMPQ9H6B4 373 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 CNIH4Q9P003 139 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 VPS4AQ9UN37 437 aa16.94■□□□□ 0.3
COPS7A-216ENST00000543170 CHCHD2Q9Y6H1 151 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-216ENST00000543170 RP1L1Q8IWN7 2480 aaPredicted RBP16.93■□□□□ 0.3
COPS7A-216ENST00000543170 E9PBE3 544 aa16.93■□□□□ 0.3
COPS7A-216ENST00000543170 RNASET2O00584 256 aaKnown RBP16.93■□□□□ 0.3
COPS7A-216ENST00000543170 TP53I11O14683 189 aa16.93■□□□□ 0.3
COPS7A-216ENST00000543170 WISP1O95388 367 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms