RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 A0A0G2JPF8 293 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 ANKRD33BA6NCL7 494 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 HNRNPCL2B2RXH8 293 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 HNRNPCL3B7ZW38 293 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 H0YGG7 62 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 FCMRO60667 390 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 MRPS14O60783 128 aaKnown RBP15.33■□□□□ 0.04
COL4A1-204ENST00000543140 LGI1O95970 557 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 INHBBP09529 407 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 HNRNPCL4P0DMR1 293 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 OSMP13725 252 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 LIPAP38571 399 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 UGT2B15P54855 530 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 ARF3P61204 181 aaPredicted RBP15.33■□□□□ 0.04
COL4A1-204ENST00000543140 GNA13Q14344 377 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 CEBPEQ15744 281 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 ZNF311Q5JNZ3 666 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 MLIPQ5VWP3 458 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 KLHL35Q6PF15 583 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 C16orf62Q7Z3J2 963 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 ABI3BPQ7Z7G0 1075 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 LRRC25Q8N386 305 aaPredicted RBP15.33■□□□□ 0.04
COL4A1-204ENST00000543140 SLC16A11Q8NCK7 471 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 GPBAR1Q8TDU6 330 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 SLC37A2Q8TED4 501 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 SLC38A1Q9H2H9 487 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 STARD5Q9NSY2 213 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 USP36Q9P275 1121 aaKnown RBP15.33■□□□□ 0.04
COL4A1-204ENST00000543140 MGAT4BQ9UQ53 548 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 DSPPQ9NZW4 1301 aa15.33■□□□□ 0.04
COL4A1-204ENST00000543140 SPTBP11277 2137 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 M0R3G1 203 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 B3GALT2O43825 422 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 TNNI3P19429 210 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 MAN2A2P49641 1150 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 EIF2B5Q13144 721 aaKnown RBP15.32■□□□□ 0.04
COL4A1-204ENST00000543140 LSRQ86X29 649 aaPredicted RBP15.32■□□□□ 0.04
COL4A1-204ENST00000543140 OR4K14Q8NGD5 310 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 B4GALNT2Q8NHY0 566 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 MIPOL1Q8TD10 442 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 RERGQ96A58 199 aaPredicted RBP15.32■□□□□ 0.04
COL4A1-204ENST00000543140 GIMAP5Q96F15 307 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 SERINC2Q96SA4 455 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 GAS2L1Q99501 681 aaPredicted RBP15.32■□□□□ 0.04
COL4A1-204ENST00000543140 ZFYVE21Q9BQ24 234 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 MAN2C1Q9NTJ4 1040 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 FKBP14Q9NWM8 211 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 DAPP1Q9UN19 280 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 GPR55Q9Y2T6 319 aaPredicted RBP15.32■□□□□ 0.04
COL4A1-204ENST00000543140 J3QRK9 145 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 THEGLP0DJG4 465 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 TYRP1P17643 537 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 TGFBR2P37173 567 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 HOXC5Q00444 222 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 MOGQ16653 247 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 UBE2UQ5VVX9 321 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 ARHGAP22Q7Z5H3 698 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 SLCO6A1Q86UG4 719 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 OR5T3Q8NGG3 340 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 RNF217Q8TC41 542 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 SLC9A6Q92581 669 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 SLC35A4Q96G79 324 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 FUZQ9BT04 418 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 ACTRT3Q9BYD9 372 aa15.32■□□□□ 0.04
COL4A1-204ENST00000543140 C2orf74A8MZ97 194 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 TLR4O00206 839 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 LDB3O75112 727 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ZIC2O95409 532 aaPredicted RBP15.31■□□□□ 0.04
COL4A1-204ENST00000543140 NTN1O95631 604 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 OXSR1O95747 527 aaPredicted RBP15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ADRA2AP08913 450 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 SMIM10L1P0DMW3 83 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 PDX1P52945 283 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 SMIM11AP58511 58 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 KIAA0895LQ68EN5 471 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 IQCHQ86VS3 1027 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 SLC15A4Q8N697 577 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 IQCF1Q8N6M8 205 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 FAM46DQ8NEK8 389 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 OR4K5Q8NGD3 323 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ADAMTS15Q8TE58 950 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 SMIM10Q96HG1 83 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ITPAQ9BY32 194 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 GSDMCQ9BYG8 508 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ALOXE3Q9BYJ1 711 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ROGDIQ9GZN7 287 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 CLN6Q9NWW5 311 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 PHF11Q9UIL8 331 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 MKLN1Q9UL63 735 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 A0A1W2PRQ8 180 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 M0R082 166 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 SLC22A1O15245 554 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 PTHP01270 115 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 CTSEP14091 401 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ILKQ13418 452 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 FZD2Q14332 565 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 TIGD6Q17RP2 521 aa15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ZNF829Q3KNS6 432 aaPredicted RBP15.31■□□□□ 0.04
COL4A1-204ENST00000543140 ATAD3BQ5T9A4 648 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms