RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 FAM13CQ8NE31 585 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 C17orf47Q8NEP4 570 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 FAM57AQ8TBR7 257 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TCP10LQ8TDR4 215 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 EXOSC8Q96B26 276 aaKnown RBP8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ZBTB9Q96C00 473 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CTHRC1Q96CG8 243 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CCDC120Q96HB5 630 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 FAM111AQ96PZ2 611 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SMC6Q96SB8 1091 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 EBPLQ9BY08 206 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TTTY12Q9BZ98 90 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CENPHQ9H3R5 247 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ZDHHC11Q9H8X9 412 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 EML4Q9HC35 981 aaKnown RBP8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TNFRSF12AQ9NP84 129 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PFDN4Q9NQP4 134 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SLC35C2Q9NQQ7 365 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 GIMAP4Q9NUV9 329 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TUBA8Q9NY65 449 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 MAT2BQ9NZL9 334 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 EHD3Q9NZN3 535 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PRODH2Q9UF12 536 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TINAGQ9UJW2 476 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 MEMO1Q9Y316 297 aa8.96□□□□□ -0.98
TNFRSF1A-214ENST00000543048 HCFC1P51610 2035 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ANKRD33BA6NCL7 494 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 FAM166BA8MTA8 275 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 HMGB1P1B2RPK0 211 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 RGS14O43566 566 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SEC22BO75396 215 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 RSL1D1O76021 490 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CHEK2O96017 543 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 NAGAP17050 411 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 DDCP20711 480 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 DRD5P21918 477 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 GPX3P22352 226 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PRPH2P23942 346 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 COL8A1P27658 744 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SOX18P35713 384 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PPICP45877 212 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 RPP38P78345 283 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ZNF763Q0D2J5 394 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ART3Q13508 389 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 EXOSC7Q15024 291 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TTMPQ5BVD1 217 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TBCELQ5QJ74 424 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TMEM198Q66K66 360 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SP5Q6BEB4 398 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CLEC6AQ6EIG7 209 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 FAM71E1Q6IPT2 247 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 NOXRED1Q6NXP6 359 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ARHGAP11AQ6P4F7 1023 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TMEM64Q6YI46 380 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 NUP54Q7Z3B4 507 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CLYBLQ8N0X4 340 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 FAM109AQ8N4B1 249 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ZNF808Q8N4W9 903 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TMEM251Q8N6I4 163 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 OR10G3Q8NGC4 313 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 OR5M3Q8NGP4 307 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ZNF675Q8TD23 568 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ITLN2Q8WWU7 325 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ARL8AQ96BM9 186 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ERP27Q96DN0 273 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 HSPBAP1Q96EW2 488 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 LCORQ96JN0 433 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ATP6V1G3Q96LB4 118 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 BBS4Q96RK4 519 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SECISBP2Q96T21 854 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PROK2Q9HC23 129 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ZFP64Q9NPA5 681 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 FAM53CQ9NYF3 392 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TAS2R7Q9NYW3 318 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SENP1Q9P0U3 644 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SLC17A7Q9P2U7 560 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CNOT11Q9UKZ1 510 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 BOKQ9UMX3 212 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ENTPD4Q9Y227 616 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TRAF6Q9Y4K3 522 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CCL27Q9Y4X3 112 aa8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CHCHD2Q9Y6H1 151 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 INTS1Q8N201 2190 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-214ENST00000543048 UNC79Q9P2D8 2635 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 A0A1B0GVC2 190 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ATP6AP2A0A1C7CYW4 349 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 MYO1GB0I1T2 1018 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 E9PLN8 166 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 NPIPB8E9PQR5 432 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ACOX3O15254 700 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 SUSD5O60279 629 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ATP6AP2O75787 350 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CBX7O95931 251 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 IGHG3P01860 377 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 TPOP07202 933 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 ABCB1P08183 1280 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 CREB1P16220 341 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 PCSK2P16519 638 aa8.94□□□□□ -0.98
TNFRSF1A-214ENST00000543048 AGAP20933 346 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms