RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 RALYQ9UKM9 306 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-203ENST00000543002 TRIM33Q9UPN9 1127 aa15.83■□□□□ 0.12
RABGGTA-203ENST00000543002 B3GNT3Q9Y2A9 372 aa15.83■□□□□ 0.12
RABGGTA-203ENST00000543002 COPG1Q9Y678 874 aaKnown RBP15.83■□□□□ 0.12
RABGGTA-203ENST00000543002 BOD1L1Q8NFC6 3051 aa15.83■□□□□ 0.12
RABGGTA-203ENST00000543002 SPTA1P02549 2419 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 PRSS51A0A1B0GVH4 220 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 CFLARO15519 480 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 EMC8O43402 210 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 ZNF354AO60765 605 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 IL6P05231 212 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 PGRP06401 933 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 DRD5P21918 477 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 PPICP45877 212 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 ZFP36L2P47974 494 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 CYB561P49447 251 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 NR0B1P51843 470 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 DGKQP52824 942 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 SEC24CP53992 1094 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 OC90Q02509 493 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 TLR1Q15399 786 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 NADK2Q4G0N4 442 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 OPN5Q6U736 354 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 GPALPP1Q8IXQ4 340 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 CLECL1Q8IZS7 167 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 MDS2Q8NDY4 140 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 OR9I1Q8NGQ6 314 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 ASB15Q8WXK1 588 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 PNPLA2Q96AD5 504 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 VSTM2LQ96N03 204 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 NXF5Q9H1B4 397 aaKnown RBP15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 CXorf36Q9H7Y0 433 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 FOLH1BQ9HBA9 442 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 TMEM45AQ9NWC5 275 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 LRFN1Q9P244 771 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 PCDHGB4Q9UN71 923 aa15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 GPR55Q9Y2T6 319 aaPredicted RBP15.82■□□□□ 0.12
RABGGTA-203ENST00000543002 TRAV17A0A0B4J275 112 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 FAM234BA2RU67 622 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 NME6O75414 186 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 NCF2P19878 526 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 SOX3P41225 446 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 POLR2JP52435 117 aaKnown RBP15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 GNGT1P63211 74 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 HBA1P69905 142 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 SF3A3Q12874 501 aaKnown RBP eCLIP15.81■□□□□ 0.122e-7■■■■■ 29.9
RABGGTA-203ENST00000543002 SQLEQ14534 574 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 OR1C1Q15619 314 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 PLEKHN1Q494U1 663 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 LYPD8Q6UX82 237 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 TMEM64Q6YI46 380 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 TAGAPQ8N103 731 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 HORMAD2Q8N7B1 307 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 NUP43Q8NFH3 380 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 FAM120BQ96EK7 910 aaKnown RBP15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 HSPBAP1Q96EW2 488 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 LCORQ96JN0 433 aaPredicted RBP15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 SIGLEC12Q96PQ1 595 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 BTBD9Q96Q07 612 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 OR52E6Q96RD3 313 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 TRIM4Q9C037 500 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 ZNF385DQ9H6B1 395 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 BTNL2Q9UIR0 455 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 ANAPC2Q9UJX6 822 aa15.81■□□□□ 0.12
RABGGTA-203ENST00000543002 GMNCA6NCL1 334 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 FRG2CA6NGY1 282 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 A8MVJ9 347 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ACOX3O15254 700 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ERN1O75460 977 aaKnown RBP15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 NEURL1O76050 574 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 OR6B1O95007 311 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ABCB1P08183 1280 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 CCT3P49368 545 aaKnown RBP15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 PRKAG1P54619 331 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 NRG3P56975 720 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 PRR5P85299 388 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 LRRC74AQ0VAA2 488 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ZNF155Q12901 538 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ZNF169Q14929 603 aaPredicted RBP15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 SPINK14Q6IE38 97 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ANKRD46Q86W74 232 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ZNF227Q86WZ6 799 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 CYP4Z2PQ8N1L4 340 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 SFXN5Q8TD22 340 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 CCDC115Q96NT0 180 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 MS4A4EQ96PG1 132 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 RABEP2Q9H5N1 569 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ZCCHC3Q9NUD5 404 aaKnown RBP15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 HPF1Q9NWY4 346 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 ERVK-11Q9UQG0 969 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 SNX8Q9Y5X2 465 aa15.8■□□□□ 0.12
RABGGTA-203ENST00000543002 GIMAP1-GIMAP5A0A087WTJ2 511 aa15.79■□□□□ 0.12
RABGGTA-203ENST00000543002 TTC36A6NLP5 189 aa15.79■□□□□ 0.12
RABGGTA-203ENST00000543002 TO15178 435 aa15.79■□□□□ 0.12
RABGGTA-203ENST00000543002 CPSF4O95639 269 aaKnown RBP15.79■□□□□ 0.12
RABGGTA-203ENST00000543002 PRB1P04280 392 aa15.79■□□□□ 0.12
RABGGTA-203ENST00000543002 FBXO45P0C2W1 286 aa15.79■□□□□ 0.12
RABGGTA-203ENST00000543002 CT45A8P0DMV1 189 aa15.79■□□□□ 0.12
RABGGTA-203ENST00000543002 CT45A9P0DMV2 189 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms