RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 GTF2H3Q13889 308 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC9A5Q14940 896 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 TRAM2Q15035 370 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 TANGO2Q6ICL3 276 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 TYW3Q6IPR3 259 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 Q6ZVL8 140 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 DENND4AQ7Z401 1863 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 SETD9Q8NE22 299 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 OR52B6Q8NGF0 335 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF671Q8TAW3 534 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC5A11Q8WWX8 675 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 TMCO6Q96DC7 493 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 SIPA1Q96FS4 1042 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 OR2A14Q96R47 310 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 FAM129BQ96TA1 746 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 ACOX2Q99424 681 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC30A2Q9BRI3 323 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 OR51B6Q9H340 312 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 DUSP21Q9H596 190 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF556Q9HAH1 456 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 RDH14Q9HBH5 336 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 ZNF224Q9NZL3 707 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 RAB23Q9ULC3 237 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 PCDHB10Q9UN67 800 aa7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 TCF20Q9UGU0 1960 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-221ENST00000542407 OR2A25A4D2G3 310 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ANTXRLA6NF34 631 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 TRABD2BA6NFA1 517 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 PRKRAO75569 313 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 POP7O75817 140 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 IGHV2-70P01814 119 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 CBSLP0DN79 551 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 PRF1P14222 555 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 NDUFB7P17568 137 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ACVR2AP27037 513 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 GRK5P34947 590 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 CBSP35520 551 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 DCTP40126 519 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 RFX2P48378 723 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 MRPL19P49406 292 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 POLR2JP52435 117 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ERVPABLB-1P60509 514 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 MEF2AQ02078 507 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 HSF2Q03933 536 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 HABP2Q14520 560 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 GRIN2CQ14957 1233 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ZXDCQ2QGD7 858 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 PTCHD3Q3KNS1 767 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ATP6AP1LQ52LC2 224 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 LETMD1Q6P1Q0 360 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 GOLGA7Q7Z5G4 137 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 OR8H3Q8N146 312 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 TRAM1L1Q8N609 369 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 IL17RCQ8NAC3 791 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 KBTBD8Q8NFY9 601 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 OR4M1Q8NGD0 313 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 OR56A4Q8NGH8 313 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 OR2T11Q8NH01 316 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 OR8K5Q8NH50 307 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ZFAND1Q8TCF1 268 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC13A3Q8WWT9 602 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ROBO4Q8WZ75 1007 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 RHBDF1Q96CC6 855 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SDHCQ99643 169 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SSX3Q99909 188 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 GDF15Q99988 308 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 PLA2G2FQ9BZM2 168 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 OR51M1Q9H341 326 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 NSUN3Q9H649 340 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 C5orf42Q9H799 3197 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 CIB4A0PJX0 185 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 RFXAPO00287 272 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 BTN3A3O00478 584 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SOD1P00441 154 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 UROSP10746 265 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 HLA-EP13747 358 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ATP1B2P14415 290 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ERP29P30040 261 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 NNMTP40261 264 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ZFP36L2P47974 494 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 RGS4P49798 205 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 HYAL1Q12794 435 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 FADDQ13158 208 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ARHGEF7Q14155 803 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 GPR68Q15743 365 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 HNRNPA1L2Q32P51 320 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 POM121L1PQ3SYA9 428 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 KLHL26Q53HC5 615 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 TOR1AIP1Q5JTV8 583 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 MLIPQ5VWP3 458 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SERPINA13PQ6UXR4 307 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 VN1R5Q7Z5H4 357 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 HIPK1Q86Z02 1210 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 VRK3Q8IV63 474 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 ADHFE1Q8IWW8 467 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 SLC43A2Q8N370 569 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 DCBLD1Q8N8Z6 715 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 OR10A6Q8NH74 314 aa7.57□□□□□ -1.2
PDLIM5-221ENST00000542407 AKR7LQ8NHP1 331 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms