RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 RAD51AP1Q96B01 352 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 TMEM186Q96B77 213 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 FAM71F1Q96KD3 344 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 TSSK2Q96PF2 358 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 RANBP9Q96S59 729 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 RASL10BQ96S79 203 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 SLC29A1Q99808 456 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 FAM213AQ9BRX8 229 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 IDI2Q9BXS1 227 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 GON7Q9BXV9 100 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PITPNM3Q9BZ71 974 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 GCOM2Q9BZD3 368 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 POLR1EQ9GZS1 481 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 TMEM245Q9H330 911 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 UBQLN3Q9H347 655 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 DPEP3Q9H4B8 488 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ACTL8Q9H568 366 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 TRIM45Q9H8W5 580 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 CD209Q9NNX6 404 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 LZTFL1Q9NQ48 299 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 SDR39U1Q9NRG7 319 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 FGF21Q9NSA1 209 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ZNF701Q9NV72 531 aaPredicted RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 INTS9Q9NV88 658 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 C2orf42Q9NWW7 574 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 P4HTMQ9NXG6 502 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 GDAP2Q9NXN4 497 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 OR6C2Q9NZP2 312 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 COX16Q9P0S2 106 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 THEGQ9P2T0 379 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 UVRAGQ9P2Y5 699 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 BAIAP2L1Q9UHR4 511 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 DAPK2Q9UIK4 370 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 DNAJC12Q9UKB3 198 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 RUVBL2Q9Y230 463 aaKnown RBP2.88□□□□□ -1.95
USP28-210ENST00000542033 KCNK6Q9Y257 313 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ERGIC3Q9Y282 383 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 AP3M1Q9Y2T2 418 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 TMED3Q9Y3Q3 217 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ZNF175Q9Y473 711 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 AP1M2Q9Y6Q5 423 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PRXQ9BXM0 1461 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 GCC2Q8IWJ2 1684 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 PFASO15067 1338 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 MROH7Q68CQ1 1323 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 KDM5BQ9UGL1 1544 aa2.88□□□□□ -1.95
USP28-210ENST00000542033 ANKRD50Q9ULJ7 1429 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 KIF14Q15058 1648 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 A0A087X0K7 114 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 A0A1B0GVL5 298 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 C2orf92A0A1B0GVN3 265 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 A0A1W2PQ67 120 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 RGSL1A5PLK6 1076 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ARHGAP42A6NI28 874 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ZSCAN5BA6NJL1 495 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ZNF879B4DU55 563 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 NPIPA3F8WFD2 350 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 H0YCG3 227 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 O00370 1275 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 KLF11O14901 512 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ARPC2O15144 300 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 CASC3O15234 703 aaKnown RBP2.87□□□□□ -1.95
USP28-210ENST00000542033 SCO2O43819 266 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 CDC123O75794 336 aaPredicted RBP2.87□□□□□ -1.95
USP28-210ENST00000542033 PLEKHA8P1O95397 391 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 GNA14O95837 355 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 MT-ATP6P00846 226 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 IGLV1-44P01699 117 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 SERPING1P05155 500 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 CEACAM1P13688 526 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ANXA8P13928 327 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 AREGP15514 252 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 CCNE1P24864 410 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 SFNP31947 248 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ETV5P41161 510 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 PPP1R2P41236 205 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 HTR2BP41595 481 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 MAGEB1P43366 347 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 RABIFP47224 123 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 CAMLGP49069 296 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 CCT3P49368 545 aaKnown RBP2.87□□□□□ -1.95
USP28-210ENST00000542033 VAMP7P51809 220 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ARFIP1P53367 373 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 AP2S1P53680 142 aaPredicted RBP2.87□□□□□ -1.95
USP28-210ENST00000542033 AP1S2P56377 157 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 SLC26A5P58743 744 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 HILS1P60008 231 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 GMFBP60983 142 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 RPL26P61254 145 aaKnown RBP2.87□□□□□ -1.95
USP28-210ENST00000542033 SNRPD1P62314 119 aaKnown RBP2.87□□□□□ -1.95
USP28-210ENST00000542033 GNGT1P63211 74 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 SLC34A1Q06495 639 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 STX3Q13277 289 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 P2RY6Q15077 328 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 HADHQ16836 314 aaKnown RBP2.87□□□□□ -1.95
USP28-210ENST00000542033 MAJINQ3KP22 176 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 LIN52Q52LA3 116 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 ANXA8L1Q5VT79 327 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 AGAP6Q5VW22 663 aa2.87□□□□□ -1.95
USP28-210ENST00000542033 OR4A47Q6IF82 309 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms