RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 CHRNEQ04844 493 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 GFOD2Q3B7J2 385 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 TANGO2Q6ICL3 276 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 CDH24Q86UP0 819 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 SLC30A8Q8IWU4 369 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 OR56A1Q8NGH5 318 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 INSM2Q96T92 566 aaPredicted RBP15.24■□□□□ 0.03
VARS2-212ENST00000542001 GNG8Q9UK08 70 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 KIF13BQ9NQT8 1826 aa15.24■□□□□ 0.03
VARS2-212ENST00000542001 RTTNQ86VV8 2226 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 CDK1P06493 297 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 FURINP09958 794 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 ADORA3P0DMS8 318 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 PORP16435 677 aaPredicted RBP15.23■□□□□ 0.03
VARS2-212ENST00000542001 GPX2P18283 190 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 ACVR2AP27037 513 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 BMP8BP34820 402 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 SKP1P63208 163 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 UBXN2BQ14CS0 331 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 TMEM53Q6P2H8 277 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 BMP8AQ7Z5Y6 402 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 OAFQ86UD1 273 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 JAZF1Q86VZ6 243 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 OR52E1Q8NGJ3 308 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 PHOSPHO1Q8TCT1 267 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 RLN3Q8WXF3 142 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 NCSTNQ92542 709 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 OR2M4Q96R27 311 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 SLC22A4Q9H015 551 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 MED20Q9H944 212 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 EXTL2Q9UBQ6 330 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 CMAHPQ9Y471 501 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 ZDBF2Q9HCK1 2354 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 CD22P20273 847 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 HSD17B2P37059 387 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 MMP12P39900 470 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 LGALS3BPQ08380 585 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 ERV3-1Q14264 604 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 ADIPOR2Q86V24 386 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 OR8J2Q8NGG1 315 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 C5orf34Q96MH7 638 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 TPSD1Q9BZJ3 242 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 NEK6Q9HC98 313 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 SIRT5Q9NXA8 310 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 PAQR5Q9NXK6 330 aaPredicted RBP15.23■□□□□ 0.03
VARS2-212ENST00000542001 SLC23A2Q9UGH3 650 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 SH2B3Q9UQQ2 575 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 FAM25EA8MYX2 175 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 NCR1O76036 304 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 SEC14L2O76054 403 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 P2RY2P41231 377 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 KEAP1Q14145 624 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 EXOSC7Q15024 291 aaKnown RBP15.23■□□□□ 0.03
VARS2-212ENST00000542001 FLYWCH1Q4VC44 716 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 PLAG1Q6DJT9 500 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 FAM83HQ6ZRV2 1179 aaPredicted RBP15.23■□□□□ 0.03
VARS2-212ENST00000542001 RIMKLAQ8IXN7 391 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 DNAJC22Q8N4W6 341 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 VN1R2Q8NFZ6 395 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 OR4K13Q8NH42 304 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 CCDC115Q96NT0 180 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 LGR4Q9BXB1 951 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 TP63Q9H3D4 680 aaPredicted RBP15.23■□□□□ 0.03
VARS2-212ENST00000542001 BRF2Q9HAW0 419 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 CYP8B1Q9UNU6 501 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 MED31Q9Y3C7 131 aa15.23■□□□□ 0.03
VARS2-212ENST00000542001 A6NL46 340 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 H0YIV9 168 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 KLK8O60259 260 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 HLA-DPB1P04440 258 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 CLEC2LP0C7M8 214 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 OMPP47874 163 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 GRSF1Q12849 480 aaKnown RBP eCLIP15.22■□□□□ 0.035e-13■■□□□ 11.5
VARS2-212ENST00000542001 SLC36A4Q6YBV0 504 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 TMPRSS9Q7Z410 1059 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 REM2Q8IYK8 340 aaPredicted RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 Q8N402 240 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 DENND6BQ8NEG7 585 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 OR6Q1Q8NGQ2 317 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 MRPL48Q96GC5 212 aaKnown RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 ERMAPQ96PL5 475 aaPredicted RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 NUFIP1Q9UHK0 495 aaKnown RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 PIKFYVEQ9Y2I7 2098 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 SVILO95425 2214 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 GRXCR2A6NFK2 248 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 EIF3FO00303 357 aaPredicted RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 HYAL3O43820 417 aaPredicted RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 HMGN1P05114 100 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 CTSLP07711 333 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 ZNF91Q05481 1191 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 IL20RBQ6UXL0 311 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 USP53Q70EK8 1073 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 ZNF367Q7RTV3 350 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 SPRED2Q7Z698 418 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 ASPGQ86U10 573 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 C12orf40Q86WS4 652 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 TSEN15Q8WW01 171 aaKnown RBP15.22■□□□□ 0.03
VARS2-212ENST00000542001 SATB2Q9UPW6 733 aa15.22■□□□□ 0.03
VARS2-212ENST00000542001 ZNF888P0CJ79 500 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms