RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 RNF111Q6ZNA4 994 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 RTL4Q6ZR62 310 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 SPPL2CQ8IUH8 684 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 LRRC34Q8IZ02 419 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 GHDCQ8N2G8 530 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 SIMC1Q8NDZ2 872 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 KLHL29Q96CT2 875 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 TEX37Q96LM6 180 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 ZNF317Q96PQ6 595 aaPredicted RBP13.14□□□□□ -0.31
LTBR-209ENST00000541102 FAIM2Q9BWQ8 316 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 DEFB127Q9H1M4 99 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 CCDC134Q9H6E4 229 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 NPHS2Q9NP85 383 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.14□□□□□ -0.31
LTBR-209ENST00000541102 TINAGQ9UJW2 476 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 UTS2RQ9UKP6 389 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 TMED5Q9Y3A6 229 aa13.14□□□□□ -0.31
LTBR-209ENST00000541102 PCNX1Q96RV3 2341 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 A0A0G2JMM0 328 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 A0A1W2PPB8 328 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 A0A1W2PRS3 328 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 PINLYPA6NC86 204 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 KIR3DP1A8MWS1 328 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 SLCO1B7G3V0H7 640 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 ANKRD28O15084 1053 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 CDC40O60508 579 aaKnown RBP eCLIP13.13□□□□□ -0.31
LTBR-209ENST00000541102 GUCY1B2O75343 617 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 CT62P0C5K7 136 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 CPMP14384 443 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 DRD2P14416 443 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 LBPP18428 481 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 NT5EP21589 574 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 SSTR4P31391 388 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 NME5P56597 212 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 MGAT2Q10469 447 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 SPRED3Q2MJR0 410 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 NXNQ6DKJ4 435 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 OGFOD2Q6N063 350 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 SLC29A4Q7RTT9 530 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 RIMKLAQ8IXN7 391 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 KIRREL3Q8IZU9 778 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 ZFP62Q8NB50 900 aaPredicted RBP13.13□□□□□ -0.31
LTBR-209ENST00000541102 ADCY4Q8NFM4 1077 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 OR7A2PQ8NGA2 310 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 NUBPLQ8TB37 319 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 SLC22A8Q8TCC7 542 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 CIDECQ96AQ7 238 aaPredicted RBP13.13□□□□□ -0.31
LTBR-209ENST00000541102 CCDC120Q96HB5 630 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 CXorf21Q9HAI6 301 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 ASIC5Q9NY37 505 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 NOP53Q9NZM5 478 aaKnown RBP13.13□□□□□ -0.31
LTBR-209ENST00000541102 DCTN4Q9UJW0 460 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 ZNF835Q9Y2P0 537 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 GTF3C1Q12789 2109 aa13.13□□□□□ -0.31
LTBR-209ENST00000541102 NOTCH2Q04721 2471 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 FAM166BA8MTA8 275 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 C9JVG2 144 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 POLR3GO15318 223 aaPredicted RBP13.12□□□□□ -0.31
LTBR-209ENST00000541102 NME6O75414 186 aaPredicted RBP13.12□□□□□ -0.31
LTBR-209ENST00000541102 CLPSP04118 112 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 P04436 131 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 VIMP08670 466 aaKnown RBP13.12□□□□□ -0.31
LTBR-209ENST00000541102 CD1EP15812 388 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 PORP16435 677 aaPredicted RBP13.12□□□□□ -0.31
LTBR-209ENST00000541102 CNR1P21554 472 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 GALNSP34059 522 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 SLC37A1P57057 533 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 PPIAP62937 165 aaKnown RBP13.12□□□□□ -0.31
LTBR-209ENST00000541102 PDE7AQ13946 482 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 HEPACAMQ14CZ8 416 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 SMU1Q2TAY7 513 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 CMPK2Q5EBM0 449 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 ZNF787Q6DD87 383 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 FAM111BQ6SJ93 734 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 IKBIPQ70UQ0 350 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 MRGPRGQ86SM5 289 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 GALNT12Q8IXK2 581 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 CCDC116Q8IYX3 515 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 OR2M7Q8NG81 312 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 OR52N2Q8NGI0 321 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 C16orf52Q8NHV5 167 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 ACTRT2Q8TDY3 377 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 SGCZQ96LD1 299 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 WWTR1Q9GZV5 400 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 REEP4Q9H6H4 257 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 ANKRA2Q9H9E1 313 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 PFDN4Q9NQP4 134 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 SLC35C2Q9NQQ7 365 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 SACM1LQ9NTJ5 587 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 AIG1Q9NVV5 245 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 EHD3Q9NZN3 535 aa13.12□□□□□ -0.31
LTBR-209ENST00000541102 A0A1B0GTH9 108 aa13.11□□□□□ -0.31
LTBR-209ENST00000541102 C2orf92A0A1B0GVN3 265 aa13.11□□□□□ -0.31
LTBR-209ENST00000541102 E9PBE3 544 aa13.11□□□□□ -0.31
LTBR-209ENST00000541102 SCAMP2O15127 329 aaKnown RBP13.11□□□□□ -0.31
LTBR-209ENST00000541102 TGDSO95455 350 aa13.11□□□□□ -0.31
LTBR-209ENST00000541102 NADKO95544 446 aaPredicted RBP13.11□□□□□ -0.31
LTBR-209ENST00000541102 CCL3P10147 92 aa13.11□□□□□ -0.31
LTBR-209ENST00000541102 LAMP1P11279 417 aa13.11□□□□□ -0.31
LTBR-209ENST00000541102 PRPS2P11908 318 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms