RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TM4SF18Q96CE8 201 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 MSLNLQ96KJ4 702 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 WDFY2Q96P53 400 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 FNDC11Q9BVV2 318 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 MED20Q9H944 212 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 BEX1Q9HBH7 125 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 TESQ9UGI8 421 aaKnown RBP9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 CSNK1G3Q9Y6M4 447 aa9.77□□□□□ -0.84
CDC42SE1-207ENST00000540998 GON4LQ3T8J9 2241 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 TGM5O43548 720 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 AKAP8O43823 692 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 SOD1P00441 154 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 CPEP16870 476 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 GPR4P46093 362 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 P2RX3P56373 397 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 WNT4P56705 351 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 KCNC3Q14003 757 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 LASP1Q14847 261 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF628Q5EBL2 1059 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 LCN1P1Q5VSP4 162 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 RAET1GQ6H3X3 334 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 SDE2Q6IQ49 451 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 LIPIQ6XZB0 460 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 HTR3DQ70Z44 454 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 PARS2Q7L3T8 475 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 PRICKLE2Q7Z3G6 844 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 SHISA5Q8N114 240 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 SIMC1Q8NDZ2 872 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 MRPL9Q9BYD2 267 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 PPIL3Q9H2H8 161 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 ISG20L2Q9H9L3 353 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 GPBP1L1Q9HC44 474 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 LHX9Q9NQ69 397 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 UCKL1Q9NWZ5 548 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 TEKT2Q9UIF3 430 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 MGAT4BQ9UQ53 548 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 LRRK1Q38SD2 2015 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 COL4A6Q14031 1691 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 CENPBD1B2RD01 187 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 PDPK1O15530 556 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 EFEMP2O95967 443 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 ALPPP05187 535 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 CHRM4P08173 479 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 TBXA2RP21731 343 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 IRS1P35568 1242 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 KCNJ5P48544 419 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 CCT3P49368 545 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 NTHL1P78549 312 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 TEKQ02763 1124 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 CHRNEQ04844 493 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 LHX8Q68G74 356 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 TRAM1L1Q8N609 369 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 OR9A1PQ8NGU1 263 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 BBS10Q8TAM1 723 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZNF354BQ96LW1 612 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 C17orf62Q9BQA9 187 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM175Q9BSA9 504 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 DIMT1Q9UNQ2 313 aaKnown RBP9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 CLCA2Q9UQC9 943 aa9.77□□□□□ -0.85
CDC42SE1-207ENST00000540998 CACNA1CQ13936 2221 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM25AB3EWG3 89 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM25CB3EWG5 89 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAM25GB3EWG6 89 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 FAAHO00519 579 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 GRM6O15303 877 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 LYRM1O43325 122 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 PIP5K1CO60331 668 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 MMP20O60882 483 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 IL1AP01583 271 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 GNSP15586 552 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 IL12RB1P42701 662 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 PNLIPRP1P54315 467 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 TOR1AIP1Q5JTV8 583 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 TMEM201Q5SNT2 666 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 PRAMEF14Q5SWL7 426 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 PIP5KL1Q5T9C9 394 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 PRAMEF13Q5VWM6 474 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 SYT9Q86SS6 491 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 DDX53Q86TM3 631 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 TRIM69Q86WT6 500 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 KLBQ86Z14 1044 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 LRRC56Q8IYG6 542 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 ELMOD2Q8IZ81 293 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 CD99L2Q8TCZ2 262 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 SMPDL3AQ92484 453 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 PHF21AQ96BD5 680 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 NEURL3Q96EH8 262 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 MAP6Q96JE9 813 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 CPEB1Q9BZB8 566 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 MCOLN1Q9GZU1 580 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 RNF32Q9H0A6 362 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 SAP130Q9H0E3 1048 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 XKR8Q9H6D3 395 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 TRIM45Q9H8W5 580 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 ZCCHC3Q9NUD5 404 aaKnown RBP9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 SLC23A2Q9UGH3 650 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 A0A087WUU8 490 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 A0A0B4J203 849 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 A0A1W2PPK0 400 aa9.76□□□□□ -0.85
CDC42SE1-207ENST00000540998 WASH3PC4AMC7 463 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms