RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PRAMEF20Q5VT98 475 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 SLC22A10Q63ZE4 541 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 FAM47EQ6ZV65 393 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 FGD2Q7Z6J4 655 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 FBXW8Q8N3Y1 598 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 FAM13CQ8NE31 585 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 OR52N2Q8NGI0 321 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 OR5M3Q8NGP4 307 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 CIDECQ96AQ7 238 aaPredicted RBP15.54■□□□□ 0.08
CD9-209ENST00000540891 TUBGCP3Q96CW5 907 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 LCORQ96JN0 433 aaPredicted RBP15.54■□□□□ 0.08
CD9-209ENST00000540891 VSTM2LQ96N03 204 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 FAM173AQ9BQD7 235 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 C1orf50Q9BV19 199 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 TTTY12Q9BZ98 90 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 TUBA8Q9NY65 449 aaPredicted RBP15.54■□□□□ 0.08
CD9-209ENST00000540891 PRODH2Q9UF12 536 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 SLC5A6Q9Y289 635 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 GPR55Q9Y2T6 319 aaPredicted RBP15.54■□□□□ 0.08
CD9-209ENST00000540891 CROCCQ5TZA2 2017 aa15.54■□□□□ 0.08
CD9-209ENST00000540891 USP9XQ93008 2570 aaPredicted RBP15.53■□□□□ 0.08
CD9-209ENST00000540891 EML6Q6ZMW3 1958 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 WIPF3A6NGB9 483 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 PLOD2O00469 737 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 TFECO14948 347 aaPredicted RBP15.53■□□□□ 0.08
CD9-209ENST00000540891 TO15178 435 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 DRD5P21918 477 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 NTSP30990 170 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 FRKP42685 505 aaPredicted RBP15.53■□□□□ 0.08
CD9-209ENST00000540891 PPICP45877 212 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 ASMTP46597 345 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 PTGR1Q14914 329 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 RPS6KA2Q15349 733 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 C4orf17Q53FE4 359 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 C1QL3Q5VWW1 255 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 DESI1Q6ICB0 168 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 TMEM107Q6UX40 140 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 NPSR1Q6W5P4 371 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 ZNF551Q7Z340 670 aaPredicted RBP15.53■□□□□ 0.08
CD9-209ENST00000540891 LIX1Q8N485 282 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 FNDC5Q8NAU1 212 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 SPPL2AQ8TCT8 520 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 SSC4DQ8WTU2 575 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 NUDT8Q8WV74 236 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 PPCDCQ96CD2 204 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 HSPBAP1Q96EW2 488 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 PPP1R36Q96LQ0 422 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 BTBD9Q96Q07 612 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 FOLH1BQ9HBA9 442 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 PNPOQ9NVS9 261 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 CNIH4Q9P003 139 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 ZNF835Q9Y2P0 537 aa15.53■□□□□ 0.08
CD9-209ENST00000540891 A0A087WV62 115 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 FRG2CA6NGY1 282 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 FAM166BA8MTA8 275 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 UPK1AO00322 258 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 PDPK1O15530 556 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 LRRTM2O43300 516 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 SNNO75324 88 aaPredicted RBP15.52■□□□□ 0.08
CD9-209ENST00000540891 PPM1BO75688 479 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 SLITRK5O94991 958 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 PSMG1O95456 288 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 LDLRP01130 860 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 ABCB1P08183 1280 aaPredicted RBP15.52■□□□□ 0.08
CD9-209ENST00000540891 CT45A8P0DMV1 189 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 CT45A9P0DMV2 189 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 MAPK1P28482 360 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 NRG3P56975 720 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 CORO7P57737 925 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 DCAF7P61962 342 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 PPIAP62937 165 aaKnown RBP15.52■□□□□ 0.08
CD9-209ENST00000540891 HYAL4Q2M3T9 481 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 TTMPQ5BVD1 217 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 CT45A2Q5DJT8 189 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 IL23RQ5VWK5 629 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 BICRALQ6AI39 1079 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 BNC2Q6ZN30 1099 aaPredicted RBP15.52■□□□□ 0.08
CD9-209ENST00000540891 GK5Q6ZS86 529 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 GHDCQ8N2G8 530 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 OR2L13Q8N349 312 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 TMEM251Q8N6I4 163 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 HGDQ93099 445 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 NTNG2Q96CW9 530 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 OMA1Q96E52 524 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 ELP4Q96EB1 424 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 PSMG3-AS1Q96PY0 264 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 AKTIPQ9H8T0 292 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 ZDHHC11Q9H8X9 412 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 IL1RL2Q9HB29 575 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 PLSCR2Q9NRY7 297 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 SH3BP4Q9P0V3 963 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 ATP6V1HQ9UI12 483 aa15.52■□□□□ 0.08
CD9-209ENST00000540891 C19orf53Q9UNZ5 99 aaPredicted RBP15.52■□□□□ 0.08
CD9-209ENST00000540891 COL12A1Q99715 3063 aa15.52■□□□□ 0.07
CD9-209ENST00000540891 EXPH5Q8NEV8 1989 aa15.51■□□□□ 0.07
CD9-209ENST00000540891 ANKRD33BA6NCL7 494 aa15.51■□□□□ 0.07
CD9-209ENST00000540891 LRRC3CA6NJW4 275 aa15.51■□□□□ 0.07
CD9-209ENST00000540891 CAPN14A8MX76 684 aa15.51■□□□□ 0.07
CD9-209ENST00000540891 SCAMP2O15127 329 aaKnown RBP15.51■□□□□ 0.07
CD9-209ENST00000540891 ACOX3O15254 700 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms