RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 LCTLQ6UWM7 567 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 CYHR1Q6ZMK1 362 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF704Q6ZNC4 412 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-214ENST00000540865 DNM1P46Q6ZS02 220 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF321PQ8N8H1 164 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 PRELID2Q8N945 189 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 TC2NQ8N9U0 490 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 C7orf57Q8NEG2 295 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 TRPV3Q8NET8 790 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 NUBPLQ8TB37 319 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 SLC22A8Q8TCC7 542 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 KRT35Q92764 455 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 ABTB1Q969K4 478 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-214ENST00000540865 FAM136AQ96C01 138 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 INTS12Q96CB8 462 aaKnown RBP4.17□□□□□ -1.74
SNHG1-214ENST00000540865 SPACA9Q96E40 222 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-214ENST00000540865 ART5Q96L15 291 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF597Q96LX8 424 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 JSRP1Q96MG2 331 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-214ENST00000540865 KCNC2Q96PR1 638 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 FOXB1Q99853 325 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 FAM118BQ9BPY3 351 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 TUBA1CQ9BQE3 449 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 PIGQQ9BRB3 760 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 SLC39A3Q9BRY0 314 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 TMEM204Q9BSN7 226 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 DOHHQ9BU89 302 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 BTBD2Q9BX70 525 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 UGT2B28Q9BY64 529 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 OSBPL8Q9BZF1 889 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 OR8D2Q9GZM6 311 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 SHARPINQ9H0F6 387 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 UBQLN3Q9H347 655 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 CHRAC1Q9NRG0 131 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 TREX1Q9NSU2 369 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 ELOVL5Q9NYP7 299 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 GALPQ9UBC7 116 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 CNOT11Q9UKZ1 510 aaKnown RBP4.17□□□□□ -1.74
SNHG1-214ENST00000540865 INTUQ9ULD6 942 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 SH2B3Q9UQQ2 575 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 PCDHA13Q9Y5I0 950 aa4.17□□□□□ -1.74
SNHG1-214ENST00000540865 CHCHD2Q9Y6H1 151 aaPredicted RBP4.17□□□□□ -1.74
SNHG1-214ENST00000540865 A0A088AWK7 358 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 A0A1W2PNV4 684 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 C17orf105B2RV13 164 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CYP7B1O75881 506 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SNX4O95219 450 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 GYPCP04921 128 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SERPINA6P08185 405 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 POU2F1P14859 743 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SRD5A1P18405 259 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 TNNI3P19429 210 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF10P21506 573 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CCKARP32238 428 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 GCKP35557 465 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 FDFT1P37268 417 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CETN2P41208 172 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 HNF4AP41235 474 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 GRIA1P42261 906 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SLC6A12P48065 614 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 HNRNPFP52597 415 aaKnown RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 STXBP1P61764 594 aaKnown RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 BTN3A2P78410 334 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 VLDLRP98155 873 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SRSF2Q01130 221 aaKnown RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 STX4Q12846 297 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 NAE1Q13564 534 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 RUNX2Q13950 521 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SERTAD2Q14140 314 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 RCN2Q14257 317 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 EFTUD2Q15029 972 aaKnown RBP eCLIP4.16□□□□□ -1.742e-44■■■■■ 46.9
SNHG1-214ENST00000540865 NTRK2Q16620 822 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 TMEM249Q2WGJ8 235 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 EIPR1Q53HC9 387 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 DCST1Q5T197 706 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ADAM5Q6NVV9 412 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 AGTRAPQ6RW13 159 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ZNF474Q6S9Z5 364 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 C12orf54Q6X4T0 127 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CLEC17AQ6ZS10 378 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CMIPQ8IY22 773 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 GCNT2Q8N0V5 402 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 OTUD6BQ8N6M0 293 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CLRN3Q8NCR9 226 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 OR10G3Q8NGC4 313 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SGMS2Q8NHU3 365 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SLC2A12Q8TD20 617 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SLC44A1Q8WWI5 657 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 KCNJ9Q92806 393 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ANKRD9Q96BM1 317 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 STARD4Q96DR4 205 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ZMYND19Q96E35 227 aaPredicted RBP4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SNF8Q96H20 258 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 FAR2Q96K12 515 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 CCDC42Q96M95 316 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 RUNDC3BQ96NL0 473 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 FAM111AQ96PZ2 611 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 ALOXE3Q9BYJ1 711 aa4.16□□□□□ -1.74
SNHG1-214ENST00000540865 SLCO5A1Q9H2Y9 848 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms