RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 KCNMB2Q9Y691 235 aa9.9□□□□□ -0.82
ATL3-204ENST00000540699 SPENQ96T58 3664 aaKnown RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 CPAMD8Q8IZJ3 1885 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 PRRC2CQ9Y520 2896 aaKnown RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 SYNDIG1LA6NDD5 238 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 FAM227AF5H4B4 570 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 H3BNX3 289 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 PYCARD-AS1I3L0S3 204 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 ARPC2O15144 300 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 FKBP6O75344 327 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 HEXBP07686 556 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 ABCB1P08183 1280 aaPredicted RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 C8orf89P0DMQ9 161 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 CPN2P22792 545 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 PPIBP23284 216 aaKnown RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 BUD31P41223 144 aaPredicted RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 HSD17B7P56937 341 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 DUSP2Q05923 314 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 ATP1A4Q13733 1029 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 TBR1Q16650 682 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 LINC00303Q3SY05 128 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 MINDY4Q4G0A6 757 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 FAM180BQ6P0A1 224 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 SERPINA11Q86U17 422 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 EXD3Q8N9H8 876 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 TMEM52Q8NDY8 209 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 OR2T12Q8NG77 320 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 SUN3Q8TAQ9 357 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 CNRIP1Q96F85 164 aaPredicted RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 ZBED6CLQ96FA7 236 aaPredicted RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 DUS3LQ96G46 650 aaKnown RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 AMDHD1Q96NU7 426 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 ECSITQ9BQ95 431 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 MESP1Q9BRJ9 268 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 THUMPD3Q9BV44 507 aaKnown RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 RBCK1Q9BYM8 510 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 GLIPR2Q9H4G4 154 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 DCLRE1BQ9H816 532 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 S100A14Q9HCY8 104 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 NEUROD4Q9HD90 331 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 GPATCH2Q9NW75 528 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 P4HTMQ9NXG6 502 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 NKX1-2Q9UD57 310 aaPredicted RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 EGFL7Q9UHF1 273 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 BCAP29Q9UHQ4 241 aa9.89□□□□□ -0.83
ATL3-204ENST00000540699 MRPS33Q9Y291 106 aaKnown RBP9.89□□□□□ -0.83
ATL3-204ENST00000540699 IGHV1-45A0A0A0MS14 117 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 A0A1W2PS29 197 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 TCRBV5S2A0A599 114 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 TCRBV16S1A1N1A0A5B0 115 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 OR2W5A6NFC9 320 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 GLOD5A6NK44 160 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 AQP12BA6NM10 295 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 EVPLLA8MZ36 301 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 B4GALT2O60909 372 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 CTNSO60931 367 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 COX6A1P12074 109 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 GGT1P19440 569 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 UQCRC2P22695 453 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 NTSP30990 170 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 ERFP50548 548 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 CDK9P50750 372 aaKnown RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 SOX8P57073 446 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 BTG2P78543 158 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 IGLV3-21P80748 117 aaPredicted RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 RCN1Q15293 331 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 SNCBQ16143 134 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 DEFB109BQ30KR1 87 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 DCAF10Q5QP82 559 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 IRAK1BP1Q5VVH5 260 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 SAXO2Q658L1 398 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 CPZQ66K79 652 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 OR52E8Q6IFG1 317 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 BORAQ6PGQ7 559 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 ANKRD37Q7Z713 158 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 IFNEQ86WN2 208 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 DHFR2Q86XF0 187 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 PTOV1Q86YD1 416 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 AQP12AQ8IXF9 295 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 MICU2Q8IYU8 434 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 CLEC4FQ8N1N0 589 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 TRIML2Q8N7C3 387 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 TMEM102Q8N9M5 508 aaPredicted RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 GOLM1Q8NBJ4 401 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 HIPK4Q8NE63 616 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 OR52E4Q8NGH9 312 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 OR52N2Q8NGI0 321 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 SLC26A7Q8TE54 656 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 STMN2Q93045 179 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 TSLPQ969D9 159 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 FAM120BQ96EK7 910 aaKnown RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 REXO5Q96IC2 774 aaKnown RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 VPS50Q96JG6 964 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 IMMP1LQ96LU5 166 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 WDR77Q9BQA1 342 aaPredicted RBP9.88□□□□□ -0.83
ATL3-204ENST00000540699 SLC35A5Q9BS91 424 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 SPATA9Q9BWV2 254 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 ZNF700Q9H0M5 742 aa9.88□□□□□ -0.83
ATL3-204ENST00000540699 NECTIN3Q9NQS3 549 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms