RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 ZNF860A6NHJ4 632 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 GFYI3L273 518 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 EEF1E1O43324 174 aaKnown RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ENTPD6O75354 484 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 UPK1BO75841 260 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 SLCO2B1O94956 709 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 RAB36O95755 333 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PAK4O96013 591 aaPredicted RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PRR35P0CG20 571 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ACVR2AP27037 513 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PTGS2P35354 604 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ACVR1BP36896 505 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PIGAP37287 484 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 DEFA5Q01523 94 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 RPA4Q13156 261 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CST6Q15828 149 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 C4orf46Q504U0 113 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 RNF111Q6ZNA4 994 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PJA1Q8NG27 643 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 OR7G3Q8NG95 312 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 DNAJA3Q96EY1 480 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PCBD2Q9H0N5 130 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CARS2Q9HA77 564 aaKnown RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 STOX2Q9P2F5 926 aaPredicted RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 COLEC10Q9Y6Z7 277 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 LOC100509620A0A075B734 347 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 A0A1B0GVC2 190 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 FEZF1A0PJY2 475 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ANTXRLA6NF34 631 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 EPOPA6NHQ4 379 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 A6NIN4 97 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ZSCAN5BA6NJL1 495 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 TMX2-CTNND1H3BSU7 103 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 REM1O75628 298 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 FUCA1P04066 466 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 TGFBR2P37173 567 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 GNALP38405 381 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ALDH3B2P48448 385 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 GBX2P52951 348 aaPredicted RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 FADDQ13158 208 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 KCNC3Q14003 757 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 RGNQ15493 299 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CCSMST1Q4G0I0 132 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 RPS26P11Q5JNZ5 115 aaPredicted RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 COMMD6Q7Z4G1 85 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 KLBQ86Z14 1044 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 SLC30A8Q8IWU4 369 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 OR4E2Q8NGC2 313 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 OR8K3Q8NH51 312 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 C5orf34Q96MH7 638 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 TM9SF2Q99805 663 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 BTBD1Q9H0C5 482 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ACOT13Q9NPJ3 140 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 THAP10Q9P2Z0 257 aaPredicted RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CD300AQ9UGN4 299 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 MED31Q9Y3C7 131 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PCDHGA3Q9Y5H0 932 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 MTCL1Q9Y4B5 1905 aaKnown RBP9.46□□□□□ -0.89
TRAF1-202ENST00000540010 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.46□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF879B4DU55 563 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 ANHXE9PGG2 379 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 ARNTLO00327 626 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 ACADLP28330 430 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 PYCR1P32322 319 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 ADAM8P78325 824 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 FAM214AQ32MH5 1076 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF791Q3KP31 576 aaPredicted RBP9.46□□□□□ -0.89
TRAF1-202ENST00000540010 CATSPEREQ5SY80 951 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 SPATC1Q76KD6 591 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 B3GNT8Q7Z7M8 397 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 PEG10Q86TG7 708 aaKnown RBP9.46□□□□□ -0.89
TRAF1-202ENST00000540010 LRRTM4Q86VH4 590 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 KIAA1958Q8N8K9 716 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 Q8N9G6 341 aaPredicted RBP9.46□□□□□ -0.89
TRAF1-202ENST00000540010 MSANTD3Q96H12 275 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 WDR26Q9H7D7 661 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 NOTCH4Q99466 2003 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 DENND4CQ5VZ89 1909 aa9.46□□□□□ -0.89
TRAF1-202ENST00000540010 TRIM3O75382 744 aaPredicted RBP9.46□□□□□ -0.9
TRAF1-202ENST00000540010 IFNA7P01567 189 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 DBIP07108 87 aaKnown RBP9.46□□□□□ -0.9
TRAF1-202ENST00000540010 RHCEP18577 417 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 CBLP22681 906 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 EDNRAP25101 427 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 STOMP27105 288 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 HTR2BP41595 481 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 GRK6P43250 576 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 SOX2P48431 317 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 RBBP4Q09028 425 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 HYAL1Q12794 435 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 EIF2B5Q13144 721 aaKnown RBP9.46□□□□□ -0.9
TRAF1-202ENST00000540010 DSG2Q14126 1118 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 TOR1AIP1Q5JTV8 583 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 ANKRD34AQ69YU3 496 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 B3GNT7Q8NFL0 401 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 OR4K5Q8NGD3 323 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 OR6C4Q8NGE1 309 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 OR13F1Q8NGS4 319 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 FGF14Q92915 247 aa9.46□□□□□ -0.9
TRAF1-202ENST00000540010 VOPP1Q96AW1 172 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms