RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SSTR4P31391 388 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 PRIM2P49643 509 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 ANXA11P50995 505 aaKnown RBP13.19□□□□□ -0.3
CD4-208ENST00000538827 RPS18P62269 152 aaKnown RBP13.19□□□□□ -0.3
CD4-208ENST00000538827 DMTNQ08495 405 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 VAC14Q08AM6 782 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 BIKQ13323 160 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 DNASE1L3Q13609 305 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 RGNQ15493 299 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 ELAVL1Q15717 326 aaKnown RBP13.19□□□□□ -0.3
CD4-208ENST00000538827 SFT2D3Q587I9 215 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 FHL5Q5TD97 284 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 MED25Q71SY5 747 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 GPR155Q7Z3F1 870 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 ANKRD37Q7Z713 158 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 C10orf111Q8N326 155 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 HORMAD2Q8N7B1 307 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 PLPP5Q8NEB5 264 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 C7orf57Q8NEG2 295 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 NCLNQ969V3 563 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 OR8D2Q9GZM6 311 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 KAT8Q9H7Z6 458 aaKnown RBP13.19□□□□□ -0.3
CD4-208ENST00000538827 SUCOQ9UBS9 1254 aaKnown RBP13.19□□□□□ -0.3
CD4-208ENST00000538827 EGFL7Q9UHF1 273 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 FAF1Q9UNN5 650 aaPredicted RBP13.19□□□□□ -0.3
CD4-208ENST00000538827 AK5Q9Y6K8 562 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 CLCA3PQ9Y6N3 262 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 CFAP46Q8IYW2 2715 aa13.19□□□□□ -0.3
CD4-208ENST00000538827 A0A087WV62 115 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 HRKO00198 91 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 PRAMEF2O60811 474 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 CBX7O95931 251 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 HMGN2P05204 90 aaKnown RBP13.18□□□□□ -0.3
CD4-208ENST00000538827 NUDT7P0C024 238 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 HSD17B1P14061 328 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 GPX2P18283 190 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 MATN1P21941 496 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 DLSTP36957 453 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 STAT5AP42229 794 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 ERFP50548 548 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 RPS15P62841 145 aaKnown RBP13.18□□□□□ -0.3
CD4-208ENST00000538827 MGAT2Q10469 447 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 BNIP2Q12982 314 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 FADDQ13158 208 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 MAP7Q14244 749 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 PGM2L1Q6PCE3 622 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 WDR53Q7Z5U6 358 aaPredicted RBP13.18□□□□□ -0.3
CD4-208ENST00000538827 SLC44A2Q8IWA5 706 aaPredicted RBP13.18□□□□□ -0.3
CD4-208ENST00000538827 ZZZ3Q8IYH5 903 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 MICU2Q8IYU8 434 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 OR2L13Q8N349 312 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 SIMC1Q8NDZ2 872 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 HIPK4Q8NE63 616 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 OR14A16Q8NHC5 309 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 SLC2A12Q8TD20 617 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 SLC9A6Q92581 669 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 DAZLQ92904 295 aaKnown RBP13.18□□□□□ -0.3
CD4-208ENST00000538827 RAB8BQ92930 207 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 C8orf44Q96CB5 159 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 ART5Q96L15 291 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 PCDHAC1Q9H158 963 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 SERHL2Q9H4I8 314 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 CD300AQ9UGN4 299 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 C19orf53Q9UNZ5 99 aaPredicted RBP13.18□□□□□ -0.3
CD4-208ENST00000538827 HECTD1Q9ULT8 2610 aa13.18□□□□□ -0.3
CD4-208ENST00000538827 ELOVL7A1L3X0 281 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 A8MUI8 341 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 PLOD3O60568 738 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 GMNNO75496 209 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 SEC24DO94855 1032 aaPredicted RBP13.17□□□□□ -0.3
CD4-208ENST00000538827 CYC1P08574 325 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 CD63P08962 238 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 NCK1P16333 377 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 CD82P27701 267 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 OTX2P32243 289 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 GALNSP34059 522 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 MVDP53602 400 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 MAP4K2Q12851 820 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 DUSP8Q13202 625 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 FLOT2Q14254 428 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 MFSD12Q6NUT3 480 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 ERICH5Q6P6B1 374 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 PAPD4Q6PIY7 484 aaKnown RBP13.17□□□□□ -0.3
CD4-208ENST00000538827 ZNF517Q6ZMY9 492 aaPredicted RBP13.17□□□□□ -0.3
CD4-208ENST00000538827 CPEB2Q7Z5Q1 589 aaKnown RBP13.17□□□□□ -0.3
CD4-208ENST00000538827 SERPINA11Q86U17 422 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 IL22RA1Q8N6P7 574 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 FAM13CQ8NE31 585 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 OR2Y1Q8NGV0 311 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 NFKBIDQ8NI38 313 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
CD4-208ENST00000538827 FIG4Q92562 907 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 NXPE2Q96DL1 559 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 C16orf58Q96GQ5 468 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 REXO5Q96IC2 774 aaKnown RBP13.17□□□□□ -0.3
CD4-208ENST00000538827 LRGUKQ96M69 825 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 ZNF583Q96ND8 569 aa13.17□□□□□ -0.3
CD4-208ENST00000538827 SLC46A1Q96NT5 459 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms