RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 MLC1Q15049 377 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 PCOLCEQ15113 449 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 LTB4RQ15722 352 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLN6-202ENST00000538696 KIRREL2Q6UWL6 708 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 SPPL2CQ8IUH8 684 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 ST13P4Q8IZP2 240 aaPredicted RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 LRRC25Q8N386 305 aaPredicted RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 TRIML2Q8N7C3 387 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 ZFP28Q8NHY6 868 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 PPWD1Q96BP3 646 aaKnown RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 REXO5Q96IC2 774 aaKnown RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 DGAT2Q96PD7 388 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 PELOQ9BRX2 385 aaKnown RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 RASSF4Q9H2L5 321 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 ADAP2Q9NPF8 381 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 PNO1Q9NRX1 252 aaKnown RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 MAGEL2Q9UJ55 1249 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 SNX8Q9Y5X2 465 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 URB1O60287 2271 aaKnown RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 IGHV1-45A0A0A0MS14 117 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 TCRBV5S2A0A599 114 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 ELOVL7A1L3X0 281 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 CDC14CA4D256 554 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 TMEM8BA6NDV4 472 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 ZNF891A8MT65 544 aaPredicted RBP16.05■□□□□ 0.16
CLN6-202ENST00000538696 GSTA4O15217 222 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 RRP8O43159 456 aaKnown RBP16.05■□□□□ 0.16
CLN6-202ENST00000538696 OR10H2O60403 315 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 IFNA16P05015 189 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 CHI3L1P36222 383 aaPredicted RBP16.05■□□□□ 0.16
CLN6-202ENST00000538696 MVDP53602 400 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 BIKQ13323 160 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 ELAVL1Q15717 326 aaKnown RBP16.05■□□□□ 0.16
CLN6-202ENST00000538696 CYP51A1Q16850 503 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 COX20Q5RI15 118 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 GLYATQ6IB77 296 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 PAPD4Q6PIY7 484 aaKnown RBP16.05■□□□□ 0.16
CLN6-202ENST00000538696 SERPINA11Q86U17 422 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 PACS2Q86VP3 889 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 PTOV1Q86YD1 416 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 CCDC116Q8IYX3 515 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 SAMD14Q8IZD0 417 aaPredicted RBP16.05■□□□□ 0.16
CLN6-202ENST00000538696 C7orf57Q8NEG2 295 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 OR11G2Q8NGC1 345 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 DOK4Q8TEW6 326 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 NEUROD4Q9HD90 331 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 GPATCH2Q9NW75 528 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 STX18Q9P2W9 335 aaKnown RBP16.05■□□□□ 0.16
CLN6-202ENST00000538696 CORO2BQ9UQ03 480 aa16.05■□□□□ 0.16
CLN6-202ENST00000538696 SAGE2PA6NJ88 616 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 AQP12BA6NM10 295 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 SEC24DO94855 1032 aaPredicted RBP16.04■□□□□ 0.16
CLN6-202ENST00000538696 ATP1B1P05026 303 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 NUDT7P0C024 238 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 ANPEPP15144 967 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 NT5EP21589 574 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 SOX18P35713 384 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 CASP9P55211 416 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 POLE2P56282 527 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 AP2B1P63010 937 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 RHDQ02161 417 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 TLE3Q04726 772 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 CDC20Q12834 499 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 ATP1A4Q13733 1029 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 RGNQ15493 299 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 SPDYE7PQ495Y7 208 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 SAXO2Q658L1 398 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 ANGPTL8Q6UXH0 198 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 RNF111Q6ZNA4 994 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 RNF130Q86XS8 419 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 AQP12AQ8IXF9 295 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 AMER2Q8N7J2 671 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 TNIP2Q8NFZ5 429 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 OR52N2Q8NGI0 321 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 OR9A2Q8NGT5 310 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 PSMA8Q8TAA3 256 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 PTPMT1Q8WUK0 201 aaPredicted RBP16.04■□□□□ 0.16
CLN6-202ENST00000538696 FIG4Q92562 907 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 NACC2Q96BF6 587 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 NSMCE2Q96MF7 247 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 ZNF700Q9H0M5 742 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 P4HTMQ9NXG6 502 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 FBXL4Q9UKA2 621 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 FRYQ5TBA9 3013 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 FREM2Q5SZK8 3169 aa16.04■□□□□ 0.16
CLN6-202ENST00000538696 C17orf105B2RV13 164 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 CXCR6O00574 342 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 KRT75O95678 551 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 BAG2O95816 211 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 CT62P0C5K7 136 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 PRKAR1AP10644 381 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 ETFAP13804 333 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 TNNI3P19429 210 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 ITPKBP27987 946 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 GALNSP34059 522 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 GPC1P35052 558 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 MGAT2Q10469 447 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 PRICKLE4Q2TBC4 344 aa16.03■□□□□ 0.16
CLN6-202ENST00000538696 CRTC2Q53ET0 693 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms