RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PRKCZQ05513 592 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 PUDPQ08623 228 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 CAMK2DQ13557 499 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 HECTD3Q5T447 861 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 FAM71E1Q6IPT2 247 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 DTX3Q8N9I9 347 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 DBF4BQ8NFT6 615 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 CEP76Q8TAP6 659 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 NXPE2Q96DL1 559 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 ZNF354BQ96LW1 612 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 MVB12BQ9H7P6 319 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 A4GALTQ9NPC4 353 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 MYNNQ9NPC7 610 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 CBLCQ9ULV8 474 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 ARHGEF33A8MVX0 844 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 KHNYNO15037 678 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 ATP1B2P14415 290 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 CELP19835 753 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 MMP11P24347 488 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 SSTR2P30874 369 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 SLC1A3P43003 542 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 CCL23P55773 120 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 DCDC1P59894 354 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 TAP2Q03519 686 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 HSD17B12Q53GQ0 312 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 MED27Q6P2C8 311 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 PODNL1Q6PEZ8 512 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 SERPINA13PQ6UXR4 307 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 ZER1Q7Z7L7 766 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 C16orf78Q8WTQ4 265 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 TMEM19Q96HH6 336 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 MRPL9Q9BYD2 267 aaKnown RBP17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 C11orf49Q9H6J7 331 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 ZC4H2Q9NQZ6 224 aa17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 STOX2Q9P2F5 926 aaPredicted RBP17.56■□□□□ 0.4
SFSWAP-207ENST00000538548 TEX13CA0A0J9YWL9 993 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 A0A1W2PRQ8 180 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 TUBAL3A6NHL2 446 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 TBL1XO60907 577 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 EPHX1P07099 455 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 IRF1P10914 325 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 DNASE1P24855 282 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 TMEM81Q6P7N7 255 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 DNAJB7Q7Z6W7 309 aaPredicted RBP17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 DCAF4L2Q8NA75 395 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 OR4D11Q8NGI4 311 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 SLC9A6Q92581 669 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 ERVMER34-1Q9H9K5 563 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 ASB6Q9NWX5 421 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 RDH8Q9NYR8 311 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 SCML1Q9UN30 329 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 MEIKINA0A087WXM9 373 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 A0A1W2PPL8 197 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 CASC3O15234 703 aaKnown RBP17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 CHST10O43529 356 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 ICAM2P13598 275 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 RBMS1P29558 406 aaKnown RBP17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 CSKP41240 450 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 RFX3P48380 749 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 TAS2R50P59544 299 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 CTAG1AP78358 180 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 HACD4Q5VWC8 232 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 TPRG1Q6ZUI0 275 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 SHFQ7M4L6 423 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 LHFPL3Q86UP9 236 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 KLHDC8AQ8IYD2 350 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 ADAMTS19Q8TE59 1207 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 OSGEPL1Q9H4B0 414 aa17.55■□□□□ 0.4
SFSWAP-207ENST00000538548 C2orf92A0A1B0GVN3 265 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 TOR1AO14656 332 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 TCRBP04435 133 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 IFNA16P05015 189 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 RPLP2P05387 115 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 ZP3P21754 424 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 KCNJ5P48544 419 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 PNLIPRP1P54315 467 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 ACSM1Q08AH1 577 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 INSL4Q14641 139 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 PRSS53Q2L4Q9 553 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 IDNKQ5T6J7 187 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 LINC00471Q8N535 108 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 HORMAD2Q8N7B1 307 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 OR4K5Q8NGD3 323 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 ASZ1Q8WWH4 475 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 ZNF624Q9P2J8 865 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 A4GNTQ9UNA3 340 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 SCN10AQ9Y5Y9 1956 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 ZNF840PA6NDX5 716 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 CD8B2A6NJW9 211 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 PPM1BO75688 479 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 CD8BP10966 210 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 GALP22466 123 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 PITPNBP48739 271 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 MAP2K6P52564 334 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 RPS26P62854 115 aaKnown RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 DBPQ10586 325 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 PIN1Q13526 163 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 TNFAIP8L2Q6P589 184 aaPredicted RBP17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 KRT74Q7RTS7 529 aa17.54■□□□□ 0.4
SFSWAP-207ENST00000538548 OAFQ86UD1 273 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms