RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 MOGSQ13724 837 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SIX1Q15475 284 aaPredicted RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 LRFN4Q6PJG9 635 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CDHR3Q6ZTQ4 885 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ZER1Q7Z7L7 766 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 VWA5B2Q8N398 1253 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PGBD5Q8N414 524 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR8J3Q8NGG0 315 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR52N2Q8NGI0 321 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR52E2Q8NGJ4 325 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TANKQ92844 425 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CDS1Q92903 461 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TMEM41AQ96HV5 264 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 MYRFLQ96LU7 910 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 KCTD7Q96MP8 289 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HOXD1Q9GZZ0 328 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FN3KQ9H479 309 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 KCNS2Q9ULS6 477 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 MYH7BA7E2Y1 1941 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 YKT6O15498 198 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PROM1O43490 865 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 KLKB1P03952 638 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PAX7P23759 505 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 IGFBP6P24592 240 aaPredicted RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 CD27P26842 260 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 RAB2AP61019 212 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 RACK1P63244 317 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 EEF1A1P68104 462 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 TLE3Q04726 772 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR7A5Q15622 319 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 NDUFA5Q16718 116 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR2T33Q8NG76 320 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR7G3Q8NG95 312 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR2L8Q8NGY9 312 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TRMT10AQ8TBZ6 339 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 NANOS1Q8WY41 292 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 L3HYPDHQ96EM0 354 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CDH20Q9HBT6 801 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TIMMDC1Q9NPL8 285 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TM7SF3Q9NS93 570 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OBP2AQ9NY56 170 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 DKK3Q9UBP4 350 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 WASF3Q9UPY6 502 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FARSAQ9Y285 508 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 A0A0X1KG70 313 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HHLA1C9JL84 531 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FTCDNL1E5RQL4 147 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FAAHO00519 579 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 TYROBPO43914 113 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 EEDO75530 441 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 GKN3PP0CG01 181 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 S1PR1P21453 382 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 GADD45AP24522 165 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HOXA9P31269 272 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PRAMEF8Q5VWM4 474 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PRAMEF7Q5VXH5 474 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 PGBD2Q6P3X8 592 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 BEND4Q6ZU67 534 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OR5K2Q8NHB8 316 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HAVCR1Q96D42 359 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SLC41A3Q96GZ6 507 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 KAT8Q9H7Z6 458 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 IL20RAQ9UHF4 553 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 DOCK1Q14185 1865 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 A0A1W2PPK0 400 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SCGNO76038 276 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CD63P08962 238 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SRFP11831 508 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CLDN8P56748 225 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 NPRL3Q12980 569 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 MAD2L1BPQ15013 274 aaPredicted RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 MEP1AQ16819 746 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HSF5Q4G112 596 aaPredicted RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 TMEM184AQ6ZMB5 413 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 Q7L0L9 218 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 IGFN1Q86VF2 1251 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ZSWIM9Q86XI8 627 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 GPALPP1Q8IXQ4 340 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 IL17RCQ8NAC3 791 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 OSBPL7Q9BZF2 842 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 CHIAQ9BZP6 476 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HHATLQ9HCP6 504 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 POT1Q9NUX5 634 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 MTMR10Q9NXD2 777 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ZNF639Q9UID6 485 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 MUTYHQ9UIF7 546 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HS3ST2Q9Y278 367 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 AP1M2Q9Y6Q5 423 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 LAMA4Q16363 1823 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 LOC285095A0A1B0GVY8 99 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 C5orf51A6NDU8 294 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 H0YGG7 62 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 FASLGP48023 281 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 HK3P52790 923 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 ARF3P61204 181 aaPredicted RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 DCDP81605 110 aaKnown RBP5.08□□□□□ -1.6
LRP6-203ENST00000538239 EFR3AQ14156 821 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 SF3B4Q15427 424 aaKnown RBP eCLIP5.08□□□□□ -1.63e-9■■■■■ 41.1
LRP6-203ENST00000538239 VMACQ2NL98 169 aa5.08□□□□□ -1.6
LRP6-203ENST00000538239 WSCD2Q2TBF2 565 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms