RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 EXO1Q9UQ84 846 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 RPL36Q9Y3U8 105 aaKnown RBP10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 DMRT1Q9Y5R6 373 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 HCFC2Q9Y5Z7 792 aa10.33□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 LOC390937A0A1W2PQ73 354 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 CSO75390 466 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 IGHV2-70P01814 119 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 STK19P49842 368 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 ZNF177Q13360 481 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC14A2Q15849 920 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 OR2B11Q5JQS5 317 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 CIR1Q86X95 450 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 GOT1L1Q8NHS2 421 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 RHEBL1Q8TAI7 183 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 ACBD6Q9BR61 282 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 PHF7Q9BWX1 381 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 CACNG6Q9BXT2 260 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 SEMA4CQ9C0C4 833 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 RNF32Q9H0A6 362 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 OPA3Q9H6K4 179 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 DDX31Q9H8H2 851 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC2A6Q9UGQ3 507 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 BACE2Q9Y5Z0 518 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 SPIN1Q9Y657 262 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 CFAP20Q9Y6A4 193 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 USP3Q9Y6I4 520 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 PLXNB2O15031 1838 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 MYO18AQ92614 2054 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 PPEF2O14830 753 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 MID1O15344 667 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 NUDT7P0C024 238 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 LMO2P25791 158 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 XKP51811 444 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 CDNFQ49AH0 187 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 ZC3H14Q6PJT7 736 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 TOMM5Q8N4H5 51 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 AKR7LQ8NHP1 331 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 FUBP1Q96AE4 644 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 FEVQ99581 238 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 EGFL8Q99944 293 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 ARL6Q9H0F7 186 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 TKTL2Q9H0I9 626 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC25A32Q9H2D1 315 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 ZFP57Q9NU63 452 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 EIF2B4Q9UI10 523 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 E9PI62 339 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 PRKYO43930 277 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 NR2F6P10588 404 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 TYRP14679 529 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 DDX6P26196 483 aaKnown RBP eCLIP10.32□□□□□ -0.768e-14■■■■■ 31.7
CLSTN3-207ENST00000537408 SPCS3P61009 180 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 RPL38P63173 70 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 INTS6LQ5JSJ4 861 aaKnown RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 SLC9B2Q86UD5 537 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 FUBP3Q96I24 572 aaKnown RBP eCLIP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 C12orf66Q96MD2 445 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 SPATA5L1Q9BVQ7 753 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 MTG2Q9H4K7 406 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 ASH2LQ9UBL3 628 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 ING1Q9UK53 422 aaPredicted RBP10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 YIPF1Q9Y548 306 aa10.32□□□□□ -0.76
CLSTN3-207ENST00000537408 A0A1B0GV90 55 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 TBC1D3BA6NDS4 549 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 DLL1O00548 723 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 MAN2B1O00754 1011 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 TPST2O60704 377 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 KRT33AO76009 404 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 ADH1CP00326 375 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 AGFG1P52594 562 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 RIDAP52758 137 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 MBTPS1Q14703 1052 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 PTPRRQ15256 657 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 SEC23BQ15437 767 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 GSG1LQ6UXU4 331 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 OR52P1PQ8NH57 321 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 MARCH2Q9P0N8 246 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 POM121BA6NF01 834 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 PRAF2O60831 178 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 KERAO60938 352 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 NDUFS3O75489 264 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 GLP2RO95838 553 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 CBR1P16152 277 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 S100A3P33764 101 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 PTGFRP43088 359 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 BDKRB1P46663 353 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 GMFBP60983 142 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 SUSD1Q6UWL2 747 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 ABI3BPQ7Z7G0 1075 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 PLA2G15Q8NCC3 412 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 PROKR2Q8NFJ6 384 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 ACOT12Q8WYK0 555 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 TADA1Q96BN2 335 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 KATNB1Q9BVA0 655 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 ANKRD12Q6UB98 2062 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 OTOFQ9HC10 1997 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 MYBPHLA2RUH7 354 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 MTMR11A4FU01 709 aa10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 EEF1E1O43324 174 aaKnown RBP10.31□□□□□ -0.76
CLSTN3-207ENST00000537408 LILRB5O75023 590 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms