RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 TIA1P31483 386 aaKnown RBP eCLIP16.46■□□□□ 0.233e-6■■■■□ 24.9
TNFRSF1A-209ENST00000536717 SOX18P35713 384 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FEN1P39748 380 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 DNASE1L1P49184 302 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CASP6P55212 293 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 RPL38P63173 70 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 MGAT2Q10469 447 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PRICKLE4Q2TBC4 344 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FAM180BQ6P0A1 224 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 GALNT18Q6P9A2 607 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 MTERF4Q7Z6M4 381 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 PAQR8Q8TEZ7 354 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 KLHL29Q96CT2 875 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 CNRIP1Q96F85 164 aaPredicted RBP16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 ZNF681Q96N22 645 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FAM173AQ9BQD7 235 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 FAIM2Q9BWQ8 316 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 OR10A5Q9H207 317 aa16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 SUCOQ9UBS9 1254 aaKnown RBP16.46■□□□□ 0.23
TNFRSF1A-209ENST00000536717 A0A1B0GTH9 108 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C2orf92A0A1B0GVN3 265 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CDC40O60508 579 aaKnown RBP eCLIP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GLSO94925 669 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TGDSO95455 350 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ATP1B1P05026 303 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 IL3P08700 152 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FBXO45P0C2W1 286 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ALDH9A1P49189 494 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GYS2P54840 703 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PPIAP62937 165 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ADORA2A-AS1P86434 159 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FOXO1Q12778 655 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 KIAA0040Q15053 153 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 RFTN2Q52LD8 501 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NOXRED1Q6NXP6 359 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FAM111BQ6SJ93 734 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GK5Q6ZS86 529 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FNDC5Q8NAU1 212 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ADIPOR1Q96A54 375 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PHF12Q96QT6 1004 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 EBPLQ9BY08 206 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZDHHC11Q9H8X9 412 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MAT2BQ9NZL9 334 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DLGAP4Q9Y2H0 992 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 POLR3HQ9Y535 204 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ARHGAP21Q5T5U3 1957 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FAM166BA8MTA8 275 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 P04436 131 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ANXA4P09525 319 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CSNK2A2P19784 350 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MAPK1P28482 360 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PIGAP37287 484 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PLGLB1Q02325 96 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MAD2L1Q13257 205 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C6orf136Q5SQH8 315 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SLC22A10Q63ZE4 541 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF787Q6DD87 383 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MTFR2Q6P444 385 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MRGPRGQ86SM5 289 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DOLPP1Q86YN1 238 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 LRRC34Q8IZ02 419 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 OR10G3Q8NGC4 313 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TP53INP1Q96A56 240 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CTHRC1Q96CG8 243 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DEFB127Q9H1M4 99 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 AKTIPQ9H8T0 292 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PROK2Q9HC23 129 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 RYDENQ9NUL5 291 aaKnown RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FGFR1OP2Q9NVK5 253 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TUBA8Q9NY65 449 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF639Q9UID6 485 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 UTS2RQ9UKP6 389 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PSME2Q9UL46 239 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DTX4Q9Y2E6 619 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MEMO1Q9Y316 297 aa16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 CHCHD2Q9Y6H1 151 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ACOT7O00154 380 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SDHDO14521 159 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF195O14628 629 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DIAPH2O60879 1101 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PDE9AO76083 593 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ESRRAP11474 423 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 PTGS2P35354 604 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DCTP40126 519 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 GSTM5P46439 218 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF763Q0D2J5 394 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 MAP4K2Q12851 820 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DUSP8Q13202 625 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NTRK2Q16620 822 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 HYAL4Q2M3T9 481 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SMU1Q2TAY7 513 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 C6orf163Q5TEZ5 329 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 TMEM64Q6YI46 380 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 NCCRP1Q6ZVX7 275 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SLC22A16Q86VW1 577 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 DND1Q8IYX4 353 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 VWA5B2Q8N398 1253 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 ZNF808Q8N4W9 903 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 SIMC1Q8NDZ2 872 aa16.44■□□□□ 0.22
TNFRSF1A-209ENST00000536717 FAM13CQ8NE31 585 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms