RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 CISD3P0C7P0 127 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PDHA2P29803 388 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 MRPL19P49406 292 aaKnown RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 ARHGDIBP52566 201 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 RPS7P62081 194 aaKnown RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 GPM6BQ13491 265 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 SF1Q15637 639 aaKnown RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 CDKL4Q5MAI5 379 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 ZDHHC20Q5W0Z9 365 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 ATG9BQ674R7 924 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PTCHD4Q6ZW05 846 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PIAS4Q8N2W9 510 aaPredicted RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 SYT14Q8NB59 555 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 CLRN3Q8NCR9 226 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 GTPBP3Q969Y2 492 aaKnown RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 TMEM159Q96B96 161 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 DPH2Q9BQC3 489 aaPredicted RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 SLC29A3Q9BZD2 475 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 TMEM184CQ9NVA4 438 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PLEKHB1Q9UF11 243 aaPredicted RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 MLXQ9UH92 298 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 LIPT1Q9Y234 373 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 DLGAP4Q9Y2H0 992 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 H0YC42 278 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PRAMEF4O60810 478 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 RGS11O94810 467 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 LDOC1O95751 146 aaPredicted RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 SCG5P05408 212 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 C8GP07360 202 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 TMEM115Q12893 351 aaPredicted RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 CHIT1Q13231 466 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 SLC14A1Q13336 389 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 SPHARQ15513 63 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 ETFDHQ16134 617 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 FAM78AQ5JUQ0 283 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PRAMEF9Q5VWM5 478 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 C19orf48Q6RUI8 117 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 OR52E4Q8NGH9 312 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 COQ8AQ8NI60 647 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 SPPL2AQ8TCT8 520 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 NXPE2Q96DL1 559 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PADI2Q9Y2J8 665 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 CACNG2Q9Y698 323 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 K7ESM1 405 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 MMP20O60882 483 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 BCKDHAP12694 445 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 PCSK2P16519 638 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 TACR1P25103 407 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 BDKRB1P46663 353 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 NAE1Q13564 534 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 KIAA0040Q15053 153 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 HENMT1Q5T8I9 393 aaKnown RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 PLAG1Q6DJT9 500 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 TMIGD1Q6UXZ0 262 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 FAM9CQ8IZT9 166 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 TMEM132CQ8N3T6 1108 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 GLYATL1Q969I3 302 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 OTUB2Q96DC9 234 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 APOLD1Q96LR9 279 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 MTERF1Q99551 399 aaKnown RBP13.22□□□□□ -0.29
LIG1-203ENST00000536218 TAPBPLQ9BX59 468 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 EBPLQ9BY08 206 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 TRPS1Q9UHF7 1281 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 FBXL2Q9UKC9 423 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 CSNK1G3Q9Y6M4 447 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
LIG1-203ENST00000536218 TNFRSF11BO00300 401 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 LRRTM2O43300 516 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 SEC14L5O43304 696 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 SSX5O60225 188 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 ADAM11O75078 769 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 CCNB2O95067 398 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 ADH1CP00326 375 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 TNFRSF1BP20333 461 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 CENPAP49450 140 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 CTBP2P56545 445 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 S100A12P80511 92 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 DEFA5Q01523 94 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 IRF8Q02556 426 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 BEST4Q8NFU0 473 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 OR10G2Q8NGC3 310 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 C1GALT1C1Q96EU7 318 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 C19orf43Q9BQ61 176 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 GABARAPL3Q9BY60 117 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 OR51B5Q9H339 312 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 ZNF768Q9H5H4 540 aaKnown RBP13.21□□□□□ -0.29
LIG1-203ENST00000536218 BEX1Q9HBH7 125 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 NUDT15Q9NV35 164 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 SLC39A1Q9NY26 324 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 DEC1Q9P2X7 70 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 YARS2Q9Y2Z4 477 aaKnown RBP13.21□□□□□ -0.29
LIG1-203ENST00000536218 SCN8AQ9UQD0 1980 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 ATG2BQ96BY7 2078 aa13.21□□□□□ -0.29
LIG1-203ENST00000536218 MTCL1Q9Y4B5 1905 aaKnown RBP13.21□□□□□ -0.29
LIG1-203ENST00000536218 TBC1D3BA6NDS4 549 aa13.21□□□□□ -0.3
LIG1-203ENST00000536218 WNT9AO14904 365 aa13.21□□□□□ -0.3
LIG1-203ENST00000536218 WDPCPO95876 746 aa13.21□□□□□ -0.3
LIG1-203ENST00000536218 DHFRP00374 187 aa13.21□□□□□ -0.3
LIG1-203ENST00000536218 WASP42768 502 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms