RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 OLAHQ9NV23 265 aa20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 C19orf53Q9UNZ5 99 aaPredicted RBP20.96■□□□□ 0.95
SFSWAP-204ENST00000535399 UPK1AO00322 258 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 PEX1O43933 1283 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 PSMG1O95456 288 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 CRYABP02511 175 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 DRD5P21918 477 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 MST1P26927 711 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 EPHA3P29320 983 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 PPICP45877 212 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 DCAF7P61962 342 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 SRSF11Q05519 484 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 HSPB3Q12988 150 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 NNATQ16517 81 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 DND1Q8IYX4 353 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 ZFP28Q8NHY6 868 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 CKAP2Q8WWK9 683 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 LCORQ96JN0 433 aaPredicted RBP20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 MAELQ96JY0 434 aaKnown RBP20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 BTBD9Q96Q07 612 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 DEPPQ9NTK1 212 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 VPS4AQ9UN37 437 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 NPFFR2Q9Y5X5 522 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 CROCCQ5TZA2 2017 aa20.95■□□□□ 0.94
SFSWAP-204ENST00000535399 GOLGA8QA0A0J9YX86 632 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 GOLGA8OA6NCC3 632 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 GOLGA8NF8WBI6 632 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 COQ9O75208 318 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 ALDOCP09972 364 aaKnown RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 CCL3P10147 92 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 EFNA1P20827 205 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 MEOX1P50221 254 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 CDK9P50750 372 aaKnown RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 TDGF1P3P51864 188 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 MANFP55145 182 aaKnown RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 NTRK2Q16620 822 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 CPTPQ5TA50 214 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 CAMKMTQ7Z624 323 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 CPSF7Q8N684 471 aaKnown RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 FAM98AQ8NCA5 519 aaKnown RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 FOLH1BQ9HBA9 442 aa20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 DDX18Q9NVP1 670 aaKnown RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 GPR55Q9Y2T6 319 aaPredicted RBP20.94■□□□□ 0.94
SFSWAP-204ENST00000535399 MYO18BQ8IUG5 2567 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 GCN1Q92616 2671 aaKnown RBP20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 A0A0G2JMM0 328 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 A0A1W2PPB8 328 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 A0A1W2PRS3 328 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 FRG2CA6NGY1 282 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 KIR3DP1A8MWS1 328 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 KLRC4-KLRK1H3BQV0 150 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 ANKRD28O15084 1053 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 TO15178 435 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 ACOX3O15254 700 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 CBX6O95503 412 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 CT45A8P0DMV1 189 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 CT45A9P0DMV2 189 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 GNLYP22749 145 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 ABCD3P28288 659 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 UQCRFS1P47985 274 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 NRG3P56975 720 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 GPR85P60893 370 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 MRPL49Q13405 166 aaKnown RBP20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 MLC1Q15049 377 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 SLC9B1Q4ZJI4 515 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 CT45A2Q5DJT8 189 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 NPSR1Q6W5P4 371 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 SPATA19Q7Z5L4 167 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 PRR22Q8IZ63 422 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 OR10G3Q8NGC4 313 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 PAQR8Q8TEZ7 354 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 HSPBAP1Q96EW2 488 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 MAGED4Q96JG8 741 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 PRPF18Q99633 342 aaKnown RBP20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 TAS2R9Q9NYW1 312 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 CHCHD2Q9Y6H1 151 aaPredicted RBP20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 USH1CQ9Y6N9 552 aa20.93■□□□□ 0.94
SFSWAP-204ENST00000535399 PINLYPA6NC86 204 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 CAPN14A8MX76 684 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 WISP2O76076 250 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 EDN3P14138 238 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 CNR1P21554 472 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 GPC1P35052 558 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 CORO7P57737 925 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 FBXW4P57775 412 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 RNFT1Q5M7Z0 435 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 SLC22A10Q63ZE4 541 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 NATD1Q8N6N6 113 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 ZFP62Q8NB50 900 aaPredicted RBP20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 POGLUT1Q8NBL1 392 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 ST6GALNAC3Q8NDV1 305 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 ACTRT2Q8TDY3 377 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 MAGEB18Q96M61 343 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 DPY30Q9C005 99 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 SIRT3Q9NTG7 399 aaPredicted RBP20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 SACM1LQ9NTJ5 587 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 ATAD3AQ9NVI7 634 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 AIG1Q9NVV5 245 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 NTMQ9P121 344 aa20.92■□□□□ 0.94
SFSWAP-204ENST00000535399 CNOT11Q9UKZ1 510 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms