RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PDK1Q15118 436 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PDK2Q15119 407 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SIX1Q15475 284 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 DPCR1Q3MIW9 517 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SYTL3Q4VX76 610 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 MIDNQ504T8 468 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 DNAJC21Q5F1R6 531 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 DCST1Q5T197 706 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 C6orf52Q5T4I8 152 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SUMO4Q6EEV6 95 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 ZNF474Q6S9Z5 364 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 RANBP10Q6VN20 620 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM47EQ6ZV65 393 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 MAATS1Q7Z4T9 603 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 ADCK2Q7Z695 626 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CTAGE6Q86UF2 777 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 LUZP1Q86V48 1076 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC22A16Q86VW1 577 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC26A11Q86WA9 606 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 RFX6Q8HWS3 928 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC22A15Q8IZD6 547 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM109AQ8N4B1 249 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 LILRB1Q8NHL6 650 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SKA2Q8WVK7 121 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SMPDL3BQ92485 455 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 DPF1Q92782 380 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 RPL36ALQ969Q0 106 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 NCLNQ969V3 563 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC22A18Q96BI1 424 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM136AQ96C01 138 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 INTS12Q96CB8 462 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 LRRC46Q96FV0 321 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CDKN2AIPNLQ96HQ2 116 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 MARK4Q96L34 752 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 JSRP1Q96MG2 331 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 OLFM3Q96PB7 478 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 RASL10BQ96S79 203 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PKP4Q99569 1192 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM118BQ9BPY3 351 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM173AQ9BQD7 235 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 MAK16Q9BXY0 300 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SLCO5A1Q9H2Y9 848 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 ESRP2Q9H6T0 727 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CHODLQ9H9P2 273 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PROK2Q9HC23 129 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 MRPS30Q9NP92 439 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 EIF2B3Q9NR50 452 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PNO1Q9NRX1 252 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 HAUS2Q9NVX0 235 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 HPF1Q9NWY4 346 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 HACD3Q9P035 362 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 KLHL8Q9P2G9 620 aaPredicted RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 GALPQ9UBC7 116 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SLC2A6Q9UGQ3 507 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 TAC3Q9UHF0 121 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SCOCQ9UIL1 159 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 ANAPC7Q9UJX3 599 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 INTUQ9ULD6 942 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PYCARDQ9ULZ3 195 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 CAMK2AQ9UQM7 478 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SH2B3Q9UQQ2 575 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 DTX4Q9Y2E6 619 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 HYOU1Q9Y4L1 999 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PCDHA3Q9Y5H8 950 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 KLK4Q9Y5K2 254 aa2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.69□□□□□ -1.98
CHMP4A-208ENST00000534106 PCM1Q15154 2024 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 HERC2O95714 4834 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 A0A096LNT2 108 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 TCRBV7S2A1N4TA0A589 114 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FAM234BA2RU67 622 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CCDC154A6NI56 674 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SAGE2PA6NJ88 616 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 LRRC53A6NM62 1247 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 A8MXE2 369 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 H0YIG0 161 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 GFYI3L273 518 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 APOL1O14791 398 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SSX4O60224 188 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 HCN1O60741 890 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ZFAND5O76080 213 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 MYO1DO94832 1006 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 AP2A2O94973 939 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 NSA2O95478 260 aaKnown RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CYP1A2P05177 515 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FHP07954 510 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 OR56A5P0C7T3 313 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 GZMAP12544 262 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 GABRA1P14867 456 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 FERP16591 822 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 ITGA2P17301 1181 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 SRD5A1P18405 259 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CRYGSP22914 178 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 IGFBP5P24593 272 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RBL1P28749 1068 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 RPA3P35244 121 aaPredicted RBP2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 OPRM1P35372 400 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 IDUAP35475 653 aa2.68□□□□□ -1.98
CHMP4A-208ENST00000534106 CPOXP36551 454 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms