RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	GPALPP1	Q8IXQ4	340 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	RNF113B	Q8IZP6	322 aa	Known RBP	4.15	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF397	Q8NF99	534 aa	Predicted RBP	4.15	□□□□□ -1.75
ATM-223	ENST00000533979	GIPC3	Q8TF64	312 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	TMEM255B	Q8WV15	326 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	SUSD6	Q92537	303 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	PINX1	Q96BK5	328 aa	Known RBP	4.15	□□□□□ -1.75
ATM-223	ENST00000533979	PRICKLE1	Q96MT3	831 aa	Predicted RBP	4.15	□□□□□ -1.75
ATM-223	ENST00000533979	BCL7B	Q9BQE9	202 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	WRAP53	Q9BUR4	548 aa	Known RBP	4.15	□□□□□ -1.75
ATM-223	ENST00000533979	FUNDC2	Q9BWH2	189 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	PKIB	Q9C010	78 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	RNF121	Q9H920	327 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	FKRP	Q9H9S5	495 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	LRRC4	Q9HBW1	653 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	RAVER2	Q9HCJ3	691 aa	Known RBP	4.15	□□□□□ -1.75
ATM-223	ENST00000533979	ZFP57	Q9NU63	452 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	P2RX2	Q9UBL9	471 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	RNF14	Q9UBS8	474 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	CRLS1	Q9UJA2	301 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF490	Q9ULM2	529 aa	Predicted RBP	4.15	□□□□□ -1.75
ATM-223	ENST00000533979	PXDN	Q92626	1479 aa		4.15	□□□□□ -1.75
ATM-223	ENST00000533979	THSD7A	Q9UPZ6	1657 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ZCWPW2	A0A1B0GU75	182 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ATP6AP2	A0A1C7CYW4	349 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	GLTPD2	A6NH11	291 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	OR52A4P	A6NMU1	304 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	C2CD4D	B7Z1M9	353 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	WASH3P	C4AMC7	463 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	NTN3	O00634	580 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ARPC1B	O15143	372 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CTAG2	O75638	210 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CGA	P01215	116 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	APOH	P02749	345 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	POLR2M	P0CAP2	368 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	HLA-DOB	P13765	273 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	GP9	P14770	177 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	GM2A	P17900	193 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	HNF1A	P20823	631 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CDH3	P22223	829 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	AXL	P30530	894 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TMPO	P42166	694 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CEBPD	P49716	269 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ETV1	P50549	477 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	PPT1	P50897	306 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CRIP2	P52943	208 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	NAPA	P54920	295 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	RPS18	P62269	152 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	RPL23A	P62750	156 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	EEF1A1	P68104	462 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	PITX1	P78337	314 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	NUCB2	P80303	420 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	SARNP	P82979	210 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	REL	Q04864	619 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TAF10	Q12962	218 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	MFAP5	Q13361	173 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	BTG3	Q14201	252 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ZNF234	Q14588	700 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ARHGAP19	Q14CB8	494 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	HEPACAM	Q14CZ8	416 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	EXOSC7	Q15024	291 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TATDN3	Q17R31	274 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ZSWIM7	Q19AV6	140 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TMEM35A	Q53FP2	167 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ARMC12	Q5T9G4	340 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	EEF1A1P5	Q5VTE0	462 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	SEL1L3	Q68CR1	1132 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	ADAM5	Q6NVV9	412 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CEACAM20	Q6UY09	585 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	G2E3	Q7L622	706 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	LHFPL4	Q7Z7J7	247 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	SLC22A16	Q86VW1	577 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TMEM219	Q86XT9	240 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	KMT5C	Q86Y97	462 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CBWD2	Q8IUF1	395 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	UBQLNL	Q8IYU4	475 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	DCLK2	Q8N568	766 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	KLHDC1	Q8N7A1	406 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	FAM184A	Q8NB25	1140 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	OR6M1	Q8NGM8	313 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	OR4L1	Q8NH43	312 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	RAB3IL1	Q8TBN0	382 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	PNPT1	Q8TCS8	783 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	P3H4	Q92791	437 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	EMG1	Q92979	244 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CAPNS2	Q96L46	248 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CXorf58	Q96LI9	332 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	CASD1	Q96PB1	797 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	RBM14	Q96PK6	669 aa	Known RBP	4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TESK2	Q96S53	571 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	S1PR3	Q99500	378 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	UBAC1	Q9BSL1	405 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	MAGT1	Q9H0U3	335 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	EXO5	Q9H790	373 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	MED20	Q9H944	212 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	SLC12A6	Q9UHW9	1150 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	PILRA	Q9UKJ1	303 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	STUB1	Q9UNE7	303 aa		4.14	□□□□□ -1.75
ATM-223	ENST00000533979	TCF19	Q9Y242	345 aa		4.14	□□□□□ -1.75

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