RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 CPEB1Q9BZB8 566 aaKnown RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 SYT4Q9H2B2 425 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 TXNL4BQ9NX01 149 aaKnown RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 ICKQ9UPZ9 632 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MOKQ9UQ07 419 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SIGLEC1Q9BZZ2 1709 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 A0A0G2JMP0 313 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 C9JVG2 144 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 FAM72CH0Y354 149 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ITPKAP23677 461 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ARNTP27540 789 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 PRKAR1BP31321 381 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MAN2A2P49641 1150 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 DAPP51397 102 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 CDKN2DP55273 166 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 CSTF1Q05048 431 aaKnown RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 CRYZQ08257 329 aaKnown RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 RSU1Q15404 277 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 RBMS2Q15434 407 aaKnown RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 GTDC1Q4AE62 458 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 FAM72AQ5TYM5 149 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 FAM171A1Q5VUB5 890 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 C12orf73Q69YU5 71 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 FAM72DQ6L9T8 149 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 FAM151BQ6UXP7 276 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SLC9B2Q86UD5 537 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 FAM72BQ86X60 149 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ZNF248Q8NDW4 579 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 OR4M2Q8NGB6 313 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 RSPRY1Q96DX4 576 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 TMEM19Q96HH6 336 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 C10orf90Q96M02 699 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 DPCDQ9BVM2 203 aaPredicted RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 ATG10Q9H0Y0 220 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 DPEP2Q9H4A9 486 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 SOX17Q9H6I2 414 aaPredicted RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 A4GALTQ9NPC4 353 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 RGS17Q9UGC6 210 aaPredicted RBP3.85□□□□□ -1.79
SOX6-217ENST00000533870 POMT2Q9UKY4 750 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ASF1AQ9Y294 204 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 PCDHGC4Q9Y5F7 938 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 ZNF780BQ9Y6R6 833 aa3.85□□□□□ -1.79
SOX6-217ENST00000533870 MTMR11A4FU01 709 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 BTBD17A6NE02 478 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 GGT3PA6NGU5 568 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 GAPDHSO14556 408 aaPredicted RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 NDUFB2O95178 105 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 OR6A2O95222 327 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 HPGDP15428 266 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 EPORP19235 508 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 DDCP20711 480 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 GPR143P51810 404 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 SF3B4Q15427 424 aaKnown RBP eCLIP3.84□□□□□ -1.79
SOX6-217ENST00000533870 ALG11Q2TAA5 492 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ARL9Q6T311 187 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 CMIPQ8IY22 773 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 EIF4E3Q8N5X7 224 aaKnown RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 NAT16Q8N8M0 369 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 CDRT4Q8N9R6 151 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 KDF1Q8NAX2 398 aaPredicted RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 UXS1Q8NBZ7 420 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 GPR26Q8NDV2 337 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 OR14K1Q8NGZ2 314 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 CLEC4CQ8WTT0 213 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ZNF689Q96CS4 500 aaPredicted RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 WDR34Q96EX3 536 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 NSUN5Q96P11 429 aaKnown RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 MBOAT4Q96T53 435 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 SLC19A3Q9BZV2 496 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ZDHHC5Q9C0B5 715 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 INIPQ9NRY2 104 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 PPP4R1LQ9P1A2 415 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 CSF2P04141 144 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 S100GP29377 79 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 HOXA11P31270 313 aaPredicted RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 PRSS3P35030 304 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 BMPR1AP36894 532 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 WNT7BP56706 349 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 PUM1Q14671 1186 aaKnown RBP eCLIP3.84□□□□□ -1.79
SOX6-217ENST00000533870 FCN2Q15485 313 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 SLC35D3Q5M8T2 416 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ATAT1Q5SQI0 421 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 CES4AQ5XG92 561 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 SLC25A25Q6KCM7 469 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ARMC6Q6NXE6 501 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 C22orf39Q6P5X5 142 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ALKAL1Q6UXT8 129 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ZNF461Q8TAF7 563 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 NEURL3Q96EH8 262 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 SCMH1Q96GD3 660 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 ART5Q96L15 291 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 OPALINQ96PE5 141 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 GFM1Q96RP9 751 aaKnown RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 SLC38A1Q9H2H9 487 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 SPNS1Q9H2V7 528 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 MTHFD2LQ9H903 347 aaPredicted RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 CYSLTR2Q9NS75 346 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 TESQ9UGI8 421 aaKnown RBP3.84□□□□□ -1.79
SOX6-217ENST00000533870 KCTD3Q9Y597 815 aa3.84□□□□□ -1.79
SOX6-217ENST00000533870 A0A0B4J2A0 478 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms