RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CNPY4Q8N129 248 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 EIF1ADQ8N9N8 165 aaKnown RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 OR9A2Q8NGT5 310 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 OR2W6PQ8NHA6 318 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 SPPL2AQ8TCT8 520 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 ASB5Q8WWX0 329 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 OMA1Q96E52 524 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 LCORQ96JN0 433 aaPredicted RBP9.58□□□□□ -0.88
CAPN1-225ENST00000533704 RILPQ96NA2 401 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 BBS4Q96RK4 519 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 UCK2Q9BZX2 261 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 ANKRA2Q9H9E1 313 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 L2HGDHQ9H9P8 463 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 SENP1Q9P0U3 644 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 SPRR3Q9UBC9 169 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 FIS1Q9Y3D6 152 aa9.58□□□□□ -0.88
CAPN1-225ENST00000533704 POLQO75417 2590 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 A0A1B0GVC2 190 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 C2orf72A6NCS6 295 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 SUSD5O60279 629 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 HCN1O60741 890 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 CDH16O75309 829 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 PPM1BO75688 479 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 DRD2P14416 443 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 KRT4P19013 534 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 ENDOUP21128 410 aaKnown RBP9.57□□□□□ -0.88
CAPN1-225ENST00000533704 TNFRSF8P28908 595 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 CHRNB4P30926 498 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 PTGER4P35408 488 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 HEPACAMQ14CZ8 416 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 ERCC6LQ2NKX8 1250 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 C1orf185Q5T7R7 199 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 ANGPTL8Q6UXH0 198 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 B3GNT6Q6ZMB0 384 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 TDRPQ86YL5 185 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 TICAM1Q8IUC6 712 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 RDH11Q8TC12 318 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 ZNF681Q96N22 645 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 DOCK7Q96N67 2140 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 GNRHR2Q96P88 292 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 IQCGQ9H095 443 aaKnown RBP9.57□□□□□ -0.88
CAPN1-225ENST00000533704 PPCSQ9HAB8 311 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 KCNJ16Q9NPI9 418 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 MIEF1Q9NQG6 463 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 SLC35C2Q9NQQ7 365 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 KLRF1Q9NZS2 232 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 PRODH2Q9UF12 536 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 POLR3HQ9Y535 204 aaPredicted RBP9.57□□□□□ -0.88
CAPN1-225ENST00000533704 KIAA1549Q9HCM3 1950 aa9.57□□□□□ -0.88
CAPN1-225ENST00000533704 PCNX3Q9H6A9 2034 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ANKRD17O75179 2603 aaKnown RBP9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ANKRD33BA6NCL7 494 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 WDR1O75083 606 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 TRIM3O75382 744 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-225ENST00000533704 REM1O75628 298 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 SNX4O95219 450 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ABCB1P08183 1280 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-225ENST00000533704 GLI4P10075 376 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 CASP3P42574 277 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 NAA20P61599 178 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 VSNL1P62760 191 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 IFFO1Q0D2I5 559 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ZNF763Q0D2J5 394 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ZNF155Q12901 538 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ZNF628Q5EBL2 1059 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 LIPMQ5VYY2 423 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 CLEC6AQ6EIG7 209 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 SH2D5Q6ZV89 423 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 NUP54Q7Z3B4 507 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 C10orf107Q8IVU9 208 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 SAMD14Q8IZD0 417 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-225ENST00000533704 FAM9CQ8IZT9 166 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 C17orf47Q8NEP4 570 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 LILRB4Q8NHJ6 448 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 NEIL3Q8TAT5 605 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 TMBIM1Q969X1 311 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 HSPBAP1Q96EW2 488 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 NODALQ96S42 347 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 TTYH2Q9BSA4 534 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ANGPTL4Q9BY76 406 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ANKZF1Q9H8Y5 726 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 GALNT9Q9HCQ5 603 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 TNFRSF12AQ9NP84 129 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 RRAGDQ9NQL2 400 aaPredicted RBP9.56□□□□□ -0.88
CAPN1-225ENST00000533704 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
CAPN1-225ENST00000533704 OXSMQ9NWU1 459 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 ZNF639Q9UID6 485 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 MID2Q9UJV3 735 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 MAPRE3Q9UPY8 281 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 SLC6A5Q9Y345 797 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 FAM215AQ9Y5M1 114 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 PTGDR2Q9Y5Y4 395 aa9.56□□□□□ -0.88
CAPN1-225ENST00000533704 NUP214P35658 2090 aaPredicted RBP9.55□□□□□ -0.88
CAPN1-225ENST00000533704 CCDC168Q8NDH2 2452 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 PRAMEF25A6NGN4 478 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 ACOX3O15254 700 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 UGT2B11O75310 529 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 SPAG7O75391 227 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 SEC22BO75396 215 aa9.55□□□□□ -0.88
CAPN1-225ENST00000533704 JUNP05412 331 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms