RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 COG8Q96MW5 612 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 OR4K3Q96R72 315 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 MTERF1Q99551 399 aaKnown RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 OSBPL10Q9BXB5 764 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 SLC26A1Q9H2B4 701 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ELOVL6Q9H5J4 265 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 DCAF13Q9NV06 445 aaKnown RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 TUBA8Q9NY65 449 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 TMEFF2Q9UIK5 374 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 HS3ST3B1Q9Y662 390 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CPAMD8Q8IZJ3 1885 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 PDZD2O15018 2839 aa7.71□□□□□ -1.17
NEDD8-207ENST00000533242 A0A1W2PPW3 197 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 G3V2T6 193 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 SCN2BO60939 215 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 MITFO75030 526 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 DIRAS1O95057 198 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 CHRM5P08912 532 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 OR56A5P0C7T3 313 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 WNT3P56703 355 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 CHIT1Q13231 466 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 MAD2L1Q13257 205 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 MEP1AQ16819 746 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 SMU1Q2TAY7 513 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 LRRC70Q7Z2Q7 622 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 ZDHHC13Q8IUH4 622 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 CLECL1Q8IZS7 167 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 FLVCR1-AS1Q8TAF5 88 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 PNPT1Q8TCS8 783 aaKnown RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 ELMO1Q92556 727 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 TFGQ92734 400 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 TANKQ92844 425 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 THOC3Q96J01 351 aaKnown RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 SEMA3GQ9NS98 782 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 FAM118AQ9NWS6 357 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 PAK1IP1Q9NWT1 392 aaPredicted RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 IRAK4Q9NWZ3 460 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 NXT1Q9UKK6 140 aaKnown RBP7.71□□□□□ -1.18
NEDD8-207ENST00000533242 ABCG2Q9UNQ0 655 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 APCP25054 2843 aa7.71□□□□□ -1.18
NEDD8-207ENST00000533242 hCG_2014768A0A024R1R8 64 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 A0A096LPI6 279 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 H0YAE9 185 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CLGNO14967 610 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CTSBP07858 339 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 PDHA2P29803 388 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 S100A3P33764 101 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 BDKRB1P46663 353 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 HLCSP50747 726 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 RPS6KA3P51812 740 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 DDX39BQ13838 428 aaKnown RBP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 DPY19L1Q2PZI1 675 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 GGTA1PQ4G0N0 100 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CCNYL2Q5T2Q4 361 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 YOD1Q5VVQ6 348 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 FRG2Q64ET8 278 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 NOXRED1Q6NXP6 359 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 METTL2BQ6P1Q9 378 aaKnown RBP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 KIRREL2Q6UWL6 708 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 R3HCC1LQ7Z5L2 792 aaKnown RBP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 MRGPRGQ86SM5 289 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 ALDH16A1Q8IZ83 802 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 OR1N1Q8NGS0 311 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 NR4A3Q92570 626 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 FAM120BQ96EK7 910 aaKnown RBP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 FRG2BQ96QU4 278 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 SPSB2Q99619 263 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 REXO4Q9GZR2 422 aaKnown RBP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 DNAJB9Q9UBS3 223 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 ITGB1BP2Q9UKP3 347 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 OTOGQ6ZRI0 2925 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 F8P00451 2351 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 A0A1B0GX78 115 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 ANKRD33BA6NCL7 494 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 FAM220BPB1ANY3 271 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 DSCR3O14972 297 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 HPP00738 406 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 C8GP07360 202 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 NUDT7P0C024 238 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CRHBPP24387 322 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 DCKP27707 260 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 SSTR2P30874 369 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 ENTPD1P49961 510 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CRYBA2P53672 197 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CD47Q08722 323 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 Q0VFX4 171 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 TESK1Q15569 626 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 ANKDD1AQ495B1 522 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 VWA2Q5GFL6 755 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 ATG9BQ674R7 924 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 MYO7BQ6PIF6 2116 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 GFRALQ6UXV0 394 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 COX15Q7KZN9 410 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 VTCN1Q7Z7D3 282 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CYP4Z1Q86W10 505 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 CHDHQ8NE62 594 aaPredicted RBP7.7□□□□□ -1.18
NEDD8-207ENST00000533242 WDR20Q8TBZ3 569 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 TESCQ96BS2 214 aa7.7□□□□□ -1.18
NEDD8-207ENST00000533242 C11orf24Q96F05 449 aaPredicted RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms