RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 TCEAL3Q969E4 200 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 MSLNLQ96KJ4 702 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 VNN3Q9NY84 501 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 UGDHO60701 494 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 GJA8P48165 433 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ACTA2P62736 377 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ACTG2P63267 376 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ADAM17P78536 824 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 C3P1Q6ZMU1 363 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 DPPA4Q7L190 304 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 TMEM151BQ8IW70 566 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 MTHFD2LQ9H903 347 aaPredicted RBP14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 KCMF1Q9P0J7 381 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 ECM29Q5VYK3 1845 aa14.05□□□□□ -0.16
PCDHA9-202ENST00000532602 EEDO75530 441 aaKnown RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 CD3GP09693 182 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 NDUFV2P19404 249 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 HOXD9P28356 352 aaPredicted RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 CDK3Q00526 305 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 E2F1Q01094 437 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 GRHL2Q6ISB3 625 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 LRRN1Q6UXK5 716 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 OR2T4Q8NH00 348 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 TRMT2BQ96GJ1 504 aaKnown RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF69Q9UC07 566 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 FANCGO15287 622 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF806P0C7X5 589 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 GRPRP30550 384 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 SOX2P48431 317 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 KANK2Q63ZY3 851 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 SSX6Q7RTT6 188 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 SCML4Q8N228 414 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 FAM174AQ8TBP5 190 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 C16orf78Q8WTQ4 265 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 HOXB13Q92826 284 aaPredicted RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC45A3Q96JT2 553 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 PREBQ9HCU5 417 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 NUDT15Q9NV35 164 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 SH2B3Q9UQQ2 575 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 A0A0J9YY10 115 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 ABCB7O75027 752 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 RIDAP52758 137 aaKnown RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 EMP2P54851 167 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 S100A10P60903 97 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 SHHQ15465 462 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 ATP6AP1Q15904 470 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 CDKN3Q16667 212 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 HSD17B12Q53GQ0 312 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 PAQR9Q6ZVX9 377 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 TMED4Q7Z7H5 227 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 PRR22Q8IZ63 422 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 TMIEQ8NEW7 156 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 TMEM9Q9P0T7 183 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 BTBD16Q32M84 506 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 PLEKHN1Q494U1 663 aaPredicted RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 RPS26P11Q5JNZ5 115 aaPredicted RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 RAB41Q5JT25 222 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 NKAPLQ5M9Q1 402 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 PNCKQ6P2M8 343 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 RANBP10Q6VN20 620 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 ACTRT3Q9BYD9 372 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 KLHL21Q9UJP4 597 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 N4BP2Q86UW6 1770 aaPredicted RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 ZCWPW2A0A1B0GU75 182 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 TDGQ13569 410 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 METTL2BQ6P1Q9 378 aaKnown RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 KDELC1Q6UW63 502 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 OR8K3Q8NH51 312 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 MAL2Q969L2 176 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 RADILQ96JH8 1075 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC22A12Q96S37 553 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 MAP3K3Q99759 626 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 PITHD1Q9GZP4 211 aaPredicted RBP14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF700Q9H0M5 742 aa14.04□□□□□ -0.16
PCDHA9-202ENST00000532602 LRRN3E7EW58 273 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SMAD9O15198 467 aaKnown RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 FMO6PO60774 539 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 BPNT1O95861 308 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 GJA4P35212 333 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 FRKP42685 505 aaPredicted RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CLCN2P51788 898 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 AKR1D1P51857 326 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ANKDD1AQ495B1 522 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 COQ5Q5HYK3 327 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ISCA2Q86U28 154 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 LAS2Q8IYD9 372 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 LRRN3Q9H3W5 708 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 DDX60LQ5H9U9 1706 aaKnown RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 M0R129 80 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 HPRP00739 348 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 HTR6P50406 440 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 HK3P52790 923 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 SLC7A9P82251 487 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 MRPS21P82921 87 aaKnown RBP14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CHRFAM7AQ494W8 412 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF773Q6PK81 442 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 ZNF709Q8N972 641 aa14.03□□□□□ -0.16
PCDHA9-202ENST00000532602 CDRT4Q8N9R6 151 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms