RNA–Protein interactions for RNA: ENST00000532575.1

CDC27-208, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 765 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-208ENST00000532575 EPPINO95925 133 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 GAAP10253 952 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 TNNI3P19429 210 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 CEACAM8P31997 349 aaPredicted RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 TIMP3P35625 211 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 KCNJ1P48048 391 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 DNASE1L1P49184 302 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 TERF1P54274 439 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 LGALS4P56470 323 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 NKX6-1P78426 367 aaPredicted RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 SORDQ00796 357 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 CD69Q07108 199 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 TGM3Q08188 693 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 STX4Q12846 297 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 GPS1Q13098 491 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 RUNX2Q13950 521 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 SERTAD2Q14140 314 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 SIX1Q15475 284 aaPredicted RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.57□□□□□ -1.2
CDC27-208ENST00000532575 MPEG1Q2M385 716 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 TMEM198Q66K66 360 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 TMPRSS11BQ86T26 416 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 THOC6Q86W42 341 aaKnown RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 LACC1Q8IV20 430 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 PM20D2Q8IYS1 436 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 ULK2Q8IYT8 1036 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 DND1Q8IYX4 353 aaKnown RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 SLC15A4Q8N697 577 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 RELL2Q8NC24 303 aaPredicted RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 SLC22A8Q8TCC7 542 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 SLCO2A1Q92959 643 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 KIAA1191Q96A73 305 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 ARSGQ96EG1 525 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 TSNARE1Q96NA8 513 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 NDNQ99608 321 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 SMR3AQ99954 134 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 SH3GL2Q99962 352 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 CNPPD1Q9BV87 410 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 ALOXE3Q9BYJ1 711 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 OR8D2Q9GZM6 311 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 PLEKHF2Q9H8W4 249 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 IARS2Q9NSE4 1012 aaKnown RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 TUBA8Q9NY65 449 aaPredicted RBP7.57□□□□□ -1.2
CDC27-208ENST00000532575 COPS7AQ9UBW8 275 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 ATG4BQ9Y4P1 393 aa7.57□□□□□ -1.2
CDC27-208ENST00000532575 FLNAP21333 2647 aaKnown RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 LRIT2A6NDA9 550 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 ANKDD1BA6NHY2 528 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 ERI3O43414 337 aaKnown RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 FGGP02679 453 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 F7P08709 466 aaPredicted RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 CCL3P10147 92 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 GNAZP19086 355 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 PPP2R1BP30154 601 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 VPS41P49754 854 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 MTTPP55157 894 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 DCAF7P61962 342 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 KCNJ2P63252 427 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 TIAL1Q01085 375 aaKnown RBP eCLIP7.56□□□□□ -1.22e-6■■■■□ 22
CDC27-208ENST00000532575 BIKQ13323 160 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 ICAM4Q14773 271 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 PCBP2Q15366 365 aaKnown RBP eCLIP7.56□□□□□ -1.23e-7■□□□□ 10.6
CDC27-208ENST00000532575 TRIP13Q15645 432 aaPredicted RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 PIGGQ5H8A4 983 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 TRIM40Q6P9F5 258 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 TMIGD1Q6UXZ0 262 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 KLHDC8AQ8IYD2 350 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 KRT78Q8N1N4 520 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 FAM47BQ8NA70 645 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 PIK3C3Q8NEB9 887 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 SPATA3Q8NHX4 192 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 NEIL3Q8TAT5 605 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 NUBPLQ8TB37 319 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 SLC2A12Q8TD20 617 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 PTPMT1Q8WUK0 201 aaPredicted RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 CCT6BQ92526 530 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 MS4A6EQ96DS6 147 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 HSPBAP1Q96EW2 488 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 PDLIM5Q96HC4 596 aaKnown RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 SERPINB12Q96P63 405 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 SERINC2Q96SA4 455 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 CAPS2Q9BXY5 557 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 REXO4Q9GZR2 422 aaKnown RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 SPNS1Q9H2V7 528 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 COPS7BQ9H9Q2 264 aaPredicted RBP7.56□□□□□ -1.2
CDC27-208ENST00000532575 CNIH4Q9P003 139 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 SPRR3Q9UBC9 169 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 SLC22A14Q9Y267 594 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 CLDN16Q9Y5I7 305 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 SPACA6W5XKT8 324 aa7.56□□□□□ -1.2
CDC27-208ENST00000532575 DNAJC13O75165 2243 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 ZNF407Q9C0G0 2248 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 C15orf38-AP3S2A0A0A6YYH1 394 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 CLCA1A8K7I4 914 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 C17orf105B2RV13 164 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 CYR61O00622 381 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 TOX4O94842 621 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 LY86O95711 162 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 TTC4O95801 387 aa7.55□□□□□ -1.2
CDC27-208ENST00000532575 KRT14P02533 472 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms