RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TO15178 435 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 HDAC3O15379 428 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 PEX1O43933 1283 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 VPS4BO75351 444 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 FREM3P0C091 2139 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 LAMP1P11279 417 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 EDN3P14138 238 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 DRD5P21918 477 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 MAPK1P28482 360 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 MC3RP41968 323 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 PPICP45877 212 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 NCBP2P52298 156 aaKnown RBP eCLIP12.84□□□□□ -0.355e-7■■■■□ 24.3
TSPAN4-220ENST00000532375 CLDN8P56748 225 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 KCNC4Q03721 635 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 FOXO1Q12778 655 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 DESI1Q6ICB0 168 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 OGFOD2Q6N063 350 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 FAM180AQ6UWF9 173 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 NPSR1Q6W5P4 371 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 RTL4Q6ZR62 310 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 ATCAYQ86WG3 371 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 CHERPQ8IWX8 916 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 TRIM42Q8IWZ5 723 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 OR2L13Q8N349 312 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 OR7A2PQ8NGA2 310 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 SLC22A8Q8TCC7 542 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 HOXB13Q92826 284 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 TMEM125Q96AQ2 219 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 PPCDCQ96CD2 204 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 MAELQ96JY0 434 aaKnown RBP12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 TIMMDC1Q9NPL8 285 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 ACSS1Q9NUB1 689 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 OLAHQ9NV23 265 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 SH3BP4Q9P0V3 963 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 VPS4AQ9UN37 437 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 ERVK-11Q9UQG0 969 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 CFL2Q9Y281 166 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 KLF13Q9Y2Y9 288 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 NPFFR2Q9Y5X5 522 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 CHCHD2Q9Y6H1 151 aaPredicted RBP12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
TSPAN4-220ENST00000532375 BCAS2O75934 225 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 SLITRK5O94991 958 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 CRYABP02511 175 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 ALDOCP09972 364 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 CNR1P21554 472 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 ABCD3P28288 659 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 MAP3K8P41279 467 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 MEOX1P50221 254 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 GPR85P60893 370 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 PPP2R2AP63151 447 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 PSG6Q00889 435 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 MLC1Q15049 377 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 EIF2S3LQ2VIR3 472 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 EXOSC6Q5RKV6 272 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 C6orf163Q5TEZ5 329 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 OR10G3Q8NGC4 313 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 HSPBAP1Q96EW2 488 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 LCORQ96JN0 433 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 BTBD9Q96Q07 612 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 WDR55Q9H6Y2 383 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 FOLH1BQ9HBA9 442 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 SLCO1B3Q9NPD5 702 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 SIRT3Q9NTG7 399 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 NOP53Q9NZM5 478 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 MARCOQ9UEW3 520 aaPredicted RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 PRODH2Q9UF12 536 aa12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 CNOT11Q9UKZ1 510 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 EIF3LQ9Y262 564 aaKnown RBP12.83□□□□□ -0.36
TSPAN4-220ENST00000532375 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 ANKUB1A6NFN9 424 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 KLRC4-KLRK1H3BQV0 150 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 PDPK1O15530 556 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 SCN2BO60939 215 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 GLSO94925 669 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 ABCB1P08183 1280 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 NAGAP17050 411 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 LBPP18428 481 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 EFNA1P20827 205 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 PRPS1L1P21108 318 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 NTSP30990 170 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 CDK9P50750 372 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 WNT3P56703 355 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 CORO7P57737 925 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 FBXW4P57775 412 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 DCAF7P61962 342 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 PHC1P78364 1004 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 MAD2L1Q13257 205 aaPredicted RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 HLA-DQA1Q5Y7H0 255 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 SLC22A10Q63ZE4 541 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 TMEM107Q6UX40 140 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 R3HCC1LQ7Z5L2 792 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 CAMKMTQ7Z624 323 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 DND1Q8IYX4 353 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 TAGAPQ8N103 731 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 POGLUT1Q8NBL1 392 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 OR2M7Q8NG81 312 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 PSMA8Q8TAA3 256 aa12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 PIWIL2Q8TC59 973 aaKnown RBP12.82□□□□□ -0.36
TSPAN4-220ENST00000532375 HGDQ93099 445 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms