RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 CDH13P55290 713 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 HSD17B7P56937 341 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 HERVK_113P63132 956 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 EEF1A2Q05639 463 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 DBPQ10586 325 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RUNX2Q13950 521 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RCN2Q14257 317 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ABRAXAS2Q15018 415 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 NSDHLQ15738 373 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ADIPOQQ15848 244 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 AP5B1Q2VPB7 878 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 C2orf76Q3KRA6 126 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCDC153Q494R4 210 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 VWA5B1Q5TIE3 1220 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 AGAP7PQ5VUJ5 663 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 KHDRBS2Q5VWX1 349 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF787Q6DD87 383 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TTC19Q6DKK2 380 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 PAOXQ6QHF9 649 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM205Q6UW68 189 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 PET117Q6UWS5 81 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZYG11AQ6WRX3 759 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 Q6ZS46 218 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SH2D5Q6ZV89 423 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF605Q86T29 641 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 HPS6Q86YV9 775 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SLC22A9Q8IVM8 553 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCDC28AQ8IWP9 274 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 KBTBD2Q8IY47 623 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SHISA5Q8N114 240 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CA13Q8N1Q1 262 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RIBC1Q8N443 379 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 C10orf53Q8N6V4 93 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 L3MBTL4Q8NA19 623 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCDC63Q8NA47 563 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 OR52B6Q8NGF0 335 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 HUS1BQ8NHY5 278 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 METTL6Q8TCB7 284 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF483Q8TF39 744 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZNF473Q8WTR7 871 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TM9SF4Q92544 642 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CCDC126Q96EE4 140 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CMTM7Q96FZ5 175 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 THOC3Q96J01 351 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 AGAP4Q96P64 663 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 QRFPRQ96P65 431 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RAB3IPQ96QF0 476 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 MTERF1Q99551 399 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CITED2Q99967 270 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TBCDQ9BTW9 1192 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TUBB6Q9BUF5 446 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 NTMT1Q9BV86 223 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 C1QTNF3Q9BXJ4 246 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ERVK-6Q9BXR3 956 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 MS4A8Q9BY19 250 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ROPN1BQ9BZX4 212 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ROGDIQ9GZN7 287 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 AICDAQ9GZX7 198 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 LHPPQ9H008 270 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 IQCGQ9H095 443 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ELOVL6Q9H5J4 265 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ROPN1Q9HAT0 212 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 BCO1Q9HAY6 547 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 ZBTB26Q9HCK0 441 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 MLXIPLQ9NP71 852 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 PRDM7Q9NQW5 492 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 LANCL2Q9NS86 450 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM140Q9NV12 185 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TBCCD1Q9NVR7 557 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 MRPL15Q9P015 296 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TNFRSF10DQ9UBN6 386 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 DUSP13Q9UII6 198 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RAB21Q9UL25 225 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 GRID1Q9ULK0 1009 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 HSF4Q9ULV5 492 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 DAPP1Q9UN19 280 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RRP15Q9Y3B9 282 aaKnown RBP5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 RNF11Q9Y3C5 154 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 TSC22D4Q9Y3Q8 395 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 SPACA6W5XKT8 324 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 CHD6Q8TD26 2715 aa5.41□□□□□ -1.54
HMGB1P42-201ENST00000532126 FAM208BQ5VWN6 2430 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 IGHV3-20A0A0C4DH32 117 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 A0A1W2PQ72 361 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 TMEM82A0PJX8 343 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 A8MXE2 369 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 G3V2L1 256 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ACOT7O00154 380 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 FOXE1O00358 373 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PLOD2O00469 737 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CLDN4O14493 209 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SUV39H1O43463 412 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SLC28A2O43868 658 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PLIN3O60664 434 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 DPM1O60762 260 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 SNRNP200O75643 2136 aaKnown RBP5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 PROCP04070 461 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 UQCRHP07919 91 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 ICAM2P13598 275 aa5.4□□□□□ -1.54
HMGB1P42-201ENST00000532126 CPA3P15088 417 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms