RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 ARL14Q8N4G2 192 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 CNNM3Q8NE01 707 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 LHX4Q969G2 390 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 RAB3CQ96E17 227 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 C14orf79Q96F83 325 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 C1orf147Q96MC9 270 aaPredicted RBP4.67□□□□□ -1.66
CASP4-208ENST00000530309 FOXN4Q96NZ1 517 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 PYGO2Q9BRQ0 406 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 KRT23Q9C075 422 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 PNNQ9H307 717 aaKnown RBP4.67□□□□□ -1.66
CASP4-208ENST00000530309 ALG9Q9H6U8 611 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 ADGRL4Q9HBW9 690 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 ZNF581Q9P0T4 197 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 RCOR3Q9P2K3 495 aaPredicted RBP4.67□□□□□ -1.66
CASP4-208ENST00000530309 RNF24Q9Y225 148 aa4.67□□□□□ -1.66
CASP4-208ENST00000530309 IGKV3D-20A0A0C4DH25 116 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 A0A0J9YVX5 310 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 PHF1O43189 567 aaPredicted RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 PDE5AO76074 875 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 VENTXO95231 258 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 SNRPCP09234 159 aaKnown RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 CYP11B1P15538 503 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 PRDX2P32119 198 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 ASMTP46597 345 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 RAG2P55895 527 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 HAND2P61296 217 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 NAAAQ02083 359 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 GABPB1Q06547 395 aaPredicted RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 LRIT3Q3SXY7 679 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 ACER2Q5QJU3 275 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 HIPK1Q86Z02 1210 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 FAM71CQ8NEG0 241 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 OR56B1Q8NGI3 324 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 OR6T1Q8NGN1 323 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 DLX4Q92988 240 aaPredicted RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 ANKRD9Q96BM1 317 aaPredicted RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 MRPL38Q96DV4 380 aaKnown RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 TSPAN18Q96SJ8 248 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 KCNK16Q96T55 309 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 APOOQ9BUR5 198 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 SOHLH2Q9NX45 425 aa4.66□□□□□ -1.66
CASP4-208ENST00000530309 PURGQ9UJV8 347 aaKnown RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 ZNF490Q9ULM2 529 aaPredicted RBP4.66□□□□□ -1.66
CASP4-208ENST00000530309 ZNF487B1APH4 448 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 PDLIM1O00151 329 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 STAM2O75886 525 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 FAM200BP0CF97 657 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 BCL3P20749 454 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 RPA1P27694 616 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 ARHGDIAP52565 204 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 BNIP1Q12981 228 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 PARP6Q2NL67 630 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 CCDC92Q53HC0 331 aaPredicted RBP4.65□□□□□ -1.67
CASP4-208ENST00000530309 ADAMTSL5Q6ZMM2 481 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 CEACAM19Q7Z692 300 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 SUMF1Q8NBK3 374 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 MINDY2Q8NBR6 621 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 WDR36Q8NI36 951 aaKnown RBP4.65□□□□□ -1.67
CASP4-208ENST00000530309 TBCKQ8TEA7 893 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 NCLNQ969V3 563 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 WBP1Q96G27 269 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 RAB17Q9H0T7 212 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 TSPY26PQ9H489 355 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 ESM1Q9NQ30 184 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 CENPMQ9NSP4 180 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 CLEC5AQ9NY25 188 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 KLF2Q9Y5W3 355 aaPredicted RBP4.65□□□□□ -1.67
CASP4-208ENST00000530309 FKBP7Q9Y680 259 aa4.65□□□□□ -1.67
CASP4-208ENST00000530309 IGHV3OR16-12A0A075B7B8 117 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 TRIM49BA6NDI0 452 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 E9PAM4 449 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 GPRIN2O60269 458 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 ARF4P18085 180 aaPredicted RBP4.64□□□□□ -1.67
CASP4-208ENST00000530309 RPL34P49207 117 aaKnown RBP4.64□□□□□ -1.67
CASP4-208ENST00000530309 DSCR10P59022 87 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 HERVK_113P63132 956 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 ERVK-8P63133 956 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 NOP14P78316 857 aaKnown RBP4.64□□□□□ -1.67
CASP4-208ENST00000530309 ZNF85Q03923 595 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 FUT7Q11130 342 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 CRMP1Q14194 572 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 SMC1AQ14683 1233 aaKnown RBP4.64□□□□□ -1.67
CASP4-208ENST00000530309 KARSQ15046 597 aaKnown RBP4.64□□□□□ -1.67
CASP4-208ENST00000530309 SEL1L2Q5TEA6 688 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 IRGCQ6NXR0 463 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 PAQR9Q6ZVX9 377 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 ZSCAN30Q86W11 494 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 CDC20BQ86Y33 519 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 ERC1Q8IUD2 1116 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 OR4F17Q8NGA8 305 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 OR52J3Q8NH60 311 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 CRYGNQ8WXF5 182 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 FCGR1BQ92637 280 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 OR4F4Q96R69 305 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 WRAP53Q9BUR4 548 aaKnown RBP4.64□□□□□ -1.67
CASP4-208ENST00000530309 ERVK-6Q9BXR3 956 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 TRIM9Q9C026 710 aa4.64□□□□□ -1.67
CASP4-208ENST00000530309 ZBP1Q9H171 429 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms