RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 HOXD1Q9GZZ0 328 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 RNF32Q9H0A6 362 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 C1orf21Q9H246 121 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 EVA1AQ9H8M9 152 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 GPR83Q9NYM4 423 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 EXO1Q9UQ84 846 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 RAXQ9Y2V3 346 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 L3MBTL1Q9Y468 752 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 OR10H1Q9Y4A9 318 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 PCDHGA9Q9Y5G4 932 aaKnown RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 HEMK1Q9Y5R4 338 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 NUP214P35658 2090 aaPredicted RBP7.38□□□□□ -1.23
SSBP3-211ENST00000528787 DCHS1Q96JQ0 3298 aa7.38□□□□□ -1.23
SSBP3-211ENST00000528787 APC2O95996 2303 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 TRBV11-1A0A0K0K1C0 115 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 LOC100653049A0A140TA62 436 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 ARGFXA6NJG6 315 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 A8MUA0 341 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 C5orf58C9J3I9 102 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 CLIC1O00299 241 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 UPK1AO00322 258 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 DNAJB6O75190 326 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 PRKRAO75569 313 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 KRT34O76011 436 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 PDE9AO76083 593 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 DDAH2O95865 285 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 CAPNS1P04632 268 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 HPGDP15428 266 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 HOXB6P17509 224 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 IL12BP29460 328 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 SSR4P51571 173 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 GPR143P51810 404 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 DGKQP52824 942 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 PRKAG1P54619 331 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 UBAP2LQ14157 1087 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 DNAL1Q4LDG9 190 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 PRAMEF8Q5VWM4 474 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 PRAMEF7Q5VXH5 474 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 ANKRD26P1Q6NSI1 321 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 H3F3CQ6NXT2 135 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF551Q7Z340 670 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 C16orf62Q7Z3J2 963 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 C6orf120Q7Z4R8 191 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 SERPINA11Q86U17 422 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 RPS19BP1Q86WX3 136 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 KRT73Q86Y46 540 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 C10orf67Q8IYJ2 551 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 ARMC10Q8N2F6 343 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 TMEM156Q8N614 296 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 ZNF615Q8N8J6 731 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 APCDD1LQ8NCL9 501 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 NFAM1Q8NET5 270 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 OR52N2Q8NGI0 321 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 OR9I1Q8NGQ6 314 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 C16orf52Q8NHV5 167 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 RASSF5Q8WWW0 418 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 ASB15Q8WXK1 588 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 JADE3Q92613 823 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 GTF2H4Q92759 462 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 VPS33AQ96AX1 596 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 PPWD1Q96BP3 646 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 C8orf44Q96CB5 159 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 LRRC58Q96CX6 371 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 TMCO6Q96DC7 493 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 FAM120BQ96EK7 910 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 WBP1Q96G27 269 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 BTBD9Q96Q07 612 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 GAL3ST4Q96RP7 486 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 SECISBP2Q96T21 854 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 ECSITQ9BQ95 431 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 LMF2Q9BU23 707 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 THUMPD3Q9BV44 507 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 WWTR1Q9GZV5 400 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 MMADHCQ9H3L0 296 aaPredicted RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 PIGUQ9H490 435 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 TPT1P8Q9HAU6 139 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 SPAG4Q9NPE6 437 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 SDHAF3Q9NRP4 125 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 MYOTQ9UBF9 498 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 P2RX2Q9UBL9 471 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 CLDN16Q9Y5I7 305 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 MRPS18BQ9Y676 258 aaKnown RBP7.37□□□□□ -1.23
SSBP3-211ENST00000528787 KCNMB2Q9Y691 235 aa7.37□□□□□ -1.23
SSBP3-211ENST00000528787 CCT8L1PA6NM43 557 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 A8MVJ9 347 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 H3BNH8 94 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 TO15178 435 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 NKX2-8O15522 239 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 DPM1O60762 260 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 SCN2BO60939 215 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 SERPINB7O75635 380 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 PSMG1O95456 288 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 HMGN2P05204 90 aaKnown RBP7.36□□□□□ -1.23
SSBP3-211ENST00000528787 GPX2P18283 190 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 MATN1P21941 496 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 IL12AP29459 219 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 TRHRP34981 398 aaPredicted RBP7.36□□□□□ -1.23
SSBP3-211ENST00000528787 CRATP43155 626 aa7.36□□□□□ -1.23
SSBP3-211ENST00000528787 CYB561P49447 251 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms