RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PSMG1O95456 288 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CELA2AP08217 269 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PRKAG1P54619 331 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC37A1P57057 533 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 HACD2Q6Y1H2 254 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RINLQ6ZS11 566 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SZRD1Q7Z422 152 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C6orf120Q7Z4R8 191 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ARHGAP24Q8N264 748 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 APCDD1LQ8NCL9 501 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 FAM13CQ8NE31 585 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NUP43Q8NFH3 380 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 B3GNT7Q8NFL0 401 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR52R1Q8NGF1 315 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR1N1Q8NGS0 311 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DNAJB8Q8NHS0 232 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SFXN5Q8TD22 340 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NCLNQ969V3 563 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ROPN1LQ96C74 230 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GIMAP5Q96F15 307 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CCNL2Q96S94 520 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CGREF1Q99674 301 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR10A5Q9H207 317 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 IKZF5Q9H5V7 419 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZNF160Q9HCG1 818 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 BCAP29Q9UHQ4 241 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZNF223Q9UK11 482 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NSG1A0A0A6YYJ2 146 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CLIC1O00299 241 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PEX12O00623 359 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 HPP00738 406 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NPPAP01160 153 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PRKAR1AP10644 381 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EMDP50402 254 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CASP9P55211 416 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PRR5P85299 388 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC25A3Q00325 362 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ART3Q13508 389 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TP53BP2Q13625 1128 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SELPLGQ14242 412 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DNAL1Q4LDG9 190 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RUNDC3AQ59EK9 446 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SAXO2Q658L1 398 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NANOGP8Q6NSW7 305 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C8orf82Q6P1X6 216 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TRIML2Q8N7C3 387 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RBM15BQ8NDT2 890 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR7G1Q8NGA0 311 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR56A1Q8NGH5 318 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PNPT1Q8TCS8 783 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MOAP1Q96BY2 351 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NEURL3Q96EH8 262 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C16orf58Q96GQ5 468 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ART5Q96L15 291 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ANKRD27Q96NW4 1050 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CPPED1Q9BRF8 314 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GPATCH1Q9BRR8 931 aaKnown RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SEMA4CQ9C0C4 833 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NANOGQ9H9S0 305 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TPT1P8Q9HAU6 139 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GPATCH2Q9NW75 528 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GID8Q9NWU2 228 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 HMGN2P05204 90 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CHI3L1P36222 383 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CPOXP36551 454 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MVDP53602 400 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RPS26P62854 115 aaKnown RBP11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MXRA7P84157 204 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 Q0VFX4 171 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 BTBD16Q32M84 506 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RABL3Q5HYI8 236 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 COX20Q5RI15 118 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PLAG1Q6DJT9 500 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C19orf48Q6RUI8 117 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RNF111Q6ZNA4 994 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 WDR53Q7Z5U6 358 aaPredicted RBP11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C9orf40Q8IXQ3 194 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C16orf52Q8NHV5 167 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 VMP1Q96GC9 406 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 IP6K3Q96PC2 410 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MS4A4EQ96PG1 132 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 YIPF4Q9BSR8 244 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SERHL2Q9H4I8 314 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CPNE5Q9HCH3 593 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EQTNQ9NQ60 294 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DTX4Q9Y2E6 619 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GMEB1Q9Y692 573 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 IGSF10Q6WRI0 2623 aa11.29□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZNF891A8MT65 544 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PRKNO60260 465 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PRAMEF2O60811 474 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 COQ9O75208 318 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 BCAS2O75934 225 aaPredicted RBP11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC6A2P23975 617 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MTPNP58546 118 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PSME3P61289 254 aa11.28□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CDC20Q12834 499 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms