RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 PRICKLE4Q2TBC4 344 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 UNC50Q53HI1 259 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 RTL6Q6ICC9 239 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 NUP54Q7Z3B4 507 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 TRABD2AQ86V40 505 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 EXOC3L1Q86VI1 746 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 PM20D2Q8IYS1 436 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 METTL6Q8TCB7 284 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 CTHRC1Q96CG8 243 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 CCDC126Q96EE4 140 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 JSRP1Q96MG2 331 aaPredicted RBP13.02□□□□□ -0.33
CAPN1-212ENST00000527887 UCK2Q9BZX2 261 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 CENPHQ9H3R5 247 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 TMEM216Q9P0N5 145 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 DCDC2Q9UHG0 476 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 MCM8Q9UJA3 840 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 ZNF225Q9UK10 706 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 A0A1B0GTL3 188 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 A0A1W2PS29 197 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 FAM90A27PA6NNH2 459 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 HSPB2A8KAH6 182 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 MANBAO00462 879 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 PPP6CO00743 305 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 DLX3O60479 287 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 ERAL1O75616 437 aaKnown RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 OR4F21O95013 312 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 HPNP05981 417 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 ENO1P06733 434 aaKnown RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 ENDOUP21128 410 aaKnown RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 DRD5P21918 477 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 GPX3P22352 226 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 GDF1P27539 372 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 CASP3P42574 277 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 SLCO1A2P46721 670 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 MASP1P48740 699 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 CDK9P50750 372 aaKnown RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 FBXW4P57775 412 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 PPP2R2AP63151 447 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 MGAT2Q10469 447 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 HEPACAMQ14CZ8 416 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 HSPB2Q16082 182 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 SPIN4Q56A73 249 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 NHSL2Q5HYW2 709 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 CES4AQ5XG92 561 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 GPRIN3Q6ZVF9 776 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 RPS27LQ71UM5 84 aaKnown RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 ULK2Q8IYT8 1036 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 C1orf52Q8N6N3 182 aaKnown RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 CDYL2Q8N8U2 506 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 KLHL29Q96CT2 875 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 NTNG2Q96CW9 530 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 DTNBP1Q96EV8 351 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 TMEM41AQ96HV5 264 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 LCORQ96JN0 433 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 ZNF681Q96N22 645 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 RILPQ96NA2 401 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 BRINP2Q9C0B6 783 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 UBQLN3Q9H347 655 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 NPDC1Q9NQX5 325 aaPredicted RBP13.01□□□□□ -0.33
CAPN1-212ENST00000527887 ALKBH4Q9NXW9 302 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 MAT2BQ9NZL9 334 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 SPRR3Q9UBC9 169 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 ADAM21Q9UKJ8 722 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 AKAP9Q99996 3911 aa13.01□□□□□ -0.33
CAPN1-212ENST00000527887 A0A0G2JNJ9 132 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 NKX2-6A6NCS4 301 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 TO15178 435 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 PPM1BO75688 479 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 ABCB1P08183 1280 aaPredicted RBP13□□□□□ -0.33
CAPN1-212ENST00000527887 TSPAN8P19075 237 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 HMOX2P30519 316 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 FEN1P39748 380 aaKnown RBP13□□□□□ -0.33
CAPN1-212ENST00000527887 PPICP45877 212 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 LCP2Q13094 533 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 DUSP8Q13202 625 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 TIGD3Q6B0B8 471 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 SLC30A6Q6NXT4 461 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 GALNT18Q6P9A2 607 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 ZNF675Q8TD23 568 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 MZB1Q8WU39 189 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 L3HYPDHQ96EM0 354 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 LRRC46Q96FV0 321 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 TMEM237Q96Q45 408 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 NXF5Q9H1B4 397 aaKnown RBP13□□□□□ -0.33
CAPN1-212ENST00000527887 SIRT5Q9NXA8 310 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 EHD3Q9NZN3 535 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 TNFRSF10DQ9UBN6 386 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 Q9UFV3 132 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 BCAP29Q9UHQ4 241 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 UTS2RQ9UKP6 389 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 C15orf41Q9Y2V0 281 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 WBP11Q9Y2W2 641 aaKnown RBP13□□□□□ -0.33
CAPN1-212ENST00000527887 POLQO75417 2590 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 CACNA1CQ13936 2221 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 ZNF407Q9C0G0 2248 aa13□□□□□ -0.33
CAPN1-212ENST00000527887 SMIM23A6NLE4 172 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 POLR3GO15318 223 aaPredicted RBP12.99□□□□□ -0.33
CAPN1-212ENST00000527887 ABCB7O75027 752 aa12.99□□□□□ -0.33
CAPN1-212ENST00000527887 TRAPPC6AO75865 159 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms