RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 WASH2PQ6VEQ5 465 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC16A12Q6ZSM3 486 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SH2D5Q6ZV89 423 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 BTN2A1Q7KYR7 527 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ISCA2Q86U28 154 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 NRROSQ86YC3 692 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 EPHX4Q8IUS5 362 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC22A15Q8IZD6 547 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 C4orf33Q8N1A6 199 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC25A45Q8N413 288 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SPATA6LQ8N4H0 392 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 GOT1L1Q8NHS2 421 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 CFAP61Q8NHU2 1237 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 STAG3L4Q8TBR4 150 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 LKAAEAR1Q8TD35 194 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 CD200R1Q8TD46 325 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 MAGEC3Q8TD91 643 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SKA2Q8WVK7 121 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 ANKRD49Q8WVL7 239 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 TFGQ92734 400 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 ZUFSPQ96AP4 578 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 NXNL1Q96CM4 212 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 LINGO1Q96FE5 620 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ATP6V1G3Q96LB4 118 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SH3GL2Q99962 352 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 H2AFJQ9BTM1 129 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 IFT27Q9BW83 186 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 GTPBP2Q9BX10 602 aaKnown RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 DERL2Q9GZP9 239 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 WWP1Q9H0M0 922 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 OR52A5Q9H2C5 316 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 TCEAL2Q9H3H9 227 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 TMEM216Q9P0N5 145 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 BLOC1S6Q9UL45 172 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 RRP15Q9Y3B9 282 aaKnown RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 HEBP2Q9Y5Z4 205 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 CSNK1G3Q9Y6M4 447 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 COLEC10Q9Y6Z7 277 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 PCM1Q15154 2024 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 BPTFQ12830 3046 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 RPS10-NUDT3A0A1W2PQS6 291 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 SAC3D1A6NKF1 404 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 LMO7DNF2Z398 122 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 F5H0A9 414 aaPredicted RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 GFYI3L273 518 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 CDC7O00311 574 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 SLC16A5O15375 505 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 SDC3O75056 442 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 LRP3O75074 770 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 GLRA3O75311 464 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 PTP4A3O75365 173 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 PSIP1O75475 530 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 B3GALNT1O75752 331 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 WISP3O95389 354 aaPredicted RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 C1orf105O95561 183 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 BAG2O95816 211 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 EML2O95834 649 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 CATP04040 527 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 RPN2P04844 631 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 C8GP07360 202 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 ZNF883P0CG24 379 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 ALPPL2P10696 532 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 F3P13726 295 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 PORP16435 677 aaPredicted RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 ALOX12P18054 663 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 TAC1P20366 129 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 CYP2A7P20853 494 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 MAGEA12P43365 314 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 CSRP3P50461 194 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 KPNA2P52292 529 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 MAGOHP61326 146 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 IL9RQ01113 521 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 DLG1Q12959 904 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 TSNQ15631 228 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 DEFB133Q30KQ1 61 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 CCDC153Q494R4 210 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 MMEL1Q495T6 779 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 ZNF658BQ4V348 819 aaPredicted RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 ARMC4Q5T2S8 1044 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 ZNF517Q6ZMY9 492 aaPredicted RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 PIWIL4Q7Z3Z4 852 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 ARL14Q8N4G2 192 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 RAB42Q8N4Z0 105 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 BANPQ8N9N5 519 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 CCDC63Q8NA47 563 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 MAPK15Q8TD08 544 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 MCOLN3Q8TDD5 553 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 SAP25Q8TEE9 199 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 KCTD4Q8WVF5 259 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 FAR1Q8WVX9 515 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 NCSTNQ92542 709 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 RAD51AP1Q96B01 352 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 TLCD1Q96CP7 247 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 CXorf40BQ96DE9 158 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 C12orf66Q96MD2 445 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 WDR77Q9BQA1 342 aaPredicted RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 LRRC61Q9BV99 259 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 B3GNT4Q9C0J1 378 aa4.24□□□□□ -1.73
USP48-211ENST00000526044 PAIP1Q9H074 479 aaKnown RBP4.24□□□□□ -1.73
USP48-211ENST00000526044 IQCGQ9H095 443 aaKnown RBP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms