RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ZNF639Q9UID6 485 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 PLLPQ9Y342 182 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 TACC2O95359 2948 aa17.03■□□□□ 0.32
CAPN1-203ENST00000525013 ARHGAP21Q5T5U3 1957 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 TRIM3O75382 744 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-203ENST00000525013 TRAPPC6AO75865 159 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 SNX4O95219 450 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 PTGER4P35408 488 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 DNAJB13P59910 316 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 GALNT18Q6P9A2 607 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 SAMD14Q8IZD0 417 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-203ENST00000525013 OR10Q1Q8NGQ4 319 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 OR9A2Q8NGT5 310 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 OR2W6PQ8NHA6 318 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 KAT2AQ92830 837 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 CTHRC1Q96CG8 243 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 LCORQ96JN0 433 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-203ENST00000525013 SECISBP2Q96T21 854 aaKnown RBP17.02■□□□□ 0.32
CAPN1-203ENST00000525013 ANGPTL4Q9BY76 406 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 SLC6A15Q9H2J7 730 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 SLC35C2Q9NQQ7 365 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 OXSMQ9NWU1 459 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 QPCTLQ9NXS2 382 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 SPRR3Q9UBC9 169 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 RNF6Q9Y252 685 aa17.02■□□□□ 0.32
CAPN1-203ENST00000525013 HCFC1P51610 2035 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 MED12Q93074 2177 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 SERTM1A2A2V5 107 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 H3BQF6 201 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 PPM1BO75688 479 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 ABCB1P08183 1280 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-203ENST00000525013 CHRNB4P30926 498 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 CASP3P42574 277 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 KIR3DL1P43629 444 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 C2orf80Q0P641 193 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 PLCXD2Q0VAA5 305 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 B3GNT6Q6ZMB0 384 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 GDF7Q7Z4P5 450 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 OMA1Q96E52 524 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 HSPBAP1Q96EW2 488 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 BBS4Q96RK4 519 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 IQCGQ9H095 443 aaKnown RBP17.01■□□□□ 0.31
CAPN1-203ENST00000525013 METTL7AQ9H8H3 244 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 ANKRA2Q9H9E1 313 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 ACKR4Q9NPB9 350 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 EHD3Q9NZN3 535 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 SENP1Q9P0U3 644 aa17.01■□□□□ 0.31
CAPN1-203ENST00000525013 FAM90A27PA6NNH2 459 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 ACOX3O15254 700 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 WDR1O75083 606 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 NAGAP17050 411 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 ENDOUP21128 410 aaKnown RBP17■□□□□ 0.31
CAPN1-203ENST00000525013 MPIP34949 423 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 SOX18P35713 384 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 PPICP45877 212 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 EMDP50402 254 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 DCAF7P61962 342 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 SLC18A2Q05940 514 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 ZNF763Q0D2J5 394 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 TOMM20Q15388 145 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 ERCC6LQ2NKX8 1250 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 ZNF628Q5EBL2 1059 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 LIPMQ5VYY2 423 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 DESI1Q6ICB0 168 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 NUP54Q7Z3B4 507 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 C10orf107Q8IVU9 208 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 LILRB4Q8NHJ6 448 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 NEIL3Q8TAT5 605 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 ZNF675Q8TD23 568 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 C11orf24Q96F05 449 aaPredicted RBP17■□□□□ 0.31
CAPN1-203ENST00000525013 GNRHR2Q96P88 292 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 TTYH2Q9BSA4 534 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 TNFRSF12AQ9NP84 129 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 RRAGDQ9NQL2 400 aaPredicted RBP17■□□□□ 0.31
CAPN1-203ENST00000525013 MID2Q9UJV3 735 aa17■□□□□ 0.31
CAPN1-203ENST00000525013 POLR3HQ9Y535 204 aaPredicted RBP17■□□□□ 0.31
CAPN1-203ENST00000525013 C15orf38-AP3S2A0A0A6YYH1 394 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 GNB5O14775 395 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 NME6O75414 186 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-203ENST00000525013 BCAS2O75934 225 aaPredicted RBP16.99■□□□□ 0.31
CAPN1-203ENST00000525013 GLI4P10075 376 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 UROSP10746 265 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 DRD5P21918 477 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 GSTM5P46439 218 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 VSNL1P62760 191 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 IFFO1Q0D2I5 559 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 C1orf185Q5T7R7 199 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 CLEC6AQ6EIG7 209 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 RTL6Q6ICC9 239 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 TRIM46Q7Z4K8 759 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 UCK2Q9BZX2 261 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 KCNJ16Q9NPI9 418 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 MIEF1Q9NQG6 463 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 SIRT5Q9NXA8 310 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 FIS1Q9Y3D6 152 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 FAM215AQ9Y5M1 114 aa16.99■□□□□ 0.31
CAPN1-203ENST00000525013 POLQO75417 2590 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 FBN2P35556 2912 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 NKX2-6A6NCS4 301 aa16.98■□□□□ 0.31
CAPN1-203ENST00000525013 FRG2CA6NGY1 282 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms