RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 C10orf120Q5SQS8 335 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PDPK2PQ6A1A2 396 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ADALQ6DHV7 355 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 TMEM211Q6ICI0 200 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SLC39A4Q6P5W5 647 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 KLHL35Q6PF15 583 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 DOK6Q6PKX4 331 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 Q6ZSR9 355 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 TPGS1Q6ZTW0 290 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ZNF534Q76KX8 674 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ARCQ7LC44 396 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PTAR1Q7Z6K3 402 aaPredicted RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 SCD5Q86SK9 330 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SDCCAG8Q86SQ7 713 aaPredicted RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 ISCA2Q86U28 154 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 VASH2Q86V25 355 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CDC20BQ86Y33 519 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 MMAAQ8IVH4 418 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 ZC3H3Q8IXZ2 948 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 CLYBLQ8N0X4 340 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 GPD1LQ8N335 351 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 DEFB119Q8N690 84 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SLC5A8Q8N695 610 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 LRRC17Q8N6Y2 441 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 POGLUT1Q8NBL1 392 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CLEC1AQ8NC01 280 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 OR56A4Q8NGH8 313 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 OR2A12Q8NGT7 310 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 NFKBIDQ8NI38 313 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 MRGPRDQ8TDS7 321 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ROBO4Q8WZ75 1007 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 HTRA1Q92743 480 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 JAKMIP2Q96AA8 810 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 RNF125Q96EQ8 232 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 GIMAP5Q96F15 307 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PGAP3Q96FM1 320 aaPredicted RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 BTN2A3PQ96KV6 586 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 C1orf74Q96LT6 269 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PRICKLE1Q96MT3 831 aaPredicted RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 ZNF641Q96N77 438 aaPredicted RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 ACCSQ96QU6 501 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 LLPHQ9BRT6 129 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 RHNO1Q9BSD3 238 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 FEM1AQ9BSK4 669 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SLC26A6Q9BXS9 759 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 CALN1Q9BXU9 219 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ILKAPQ9H0C8 392 aaPredicted RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 SLC26A1Q9H2B4 701 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SNX25Q9H3E2 840 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 WDR54Q9H977 334 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 MAGEF1Q9HAY2 307 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PCDHB16Q9NRJ7 776 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 OLAHQ9NV23 265 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ASF1BQ9NVP2 202 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 OSER1Q9NX31 292 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 TRMT1Q9NXH9 659 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 SLC39A1Q9NY26 324 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 COQ3Q9NZJ6 369 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 VPS54Q9P1Q0 977 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 VPS18Q9P253 973 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 RCC2Q9P258 522 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 NFKBIL1Q9UBC1 381 aaPredicted RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 NXT1Q9UKK6 140 aaKnown RBP1.39□□□□□ -2.19
CD44-212ENST00000524922 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP1.39□□□□□ -2.19
CD44-212ENST00000524922 TP53TG3Q9ULZ0 132 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 GPR34Q9UPC5 381 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 BTRCQ9Y297 605 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 B3GALT5Q9Y2C3 310 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SLC17A4Q9Y2C5 497 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 SEC16AO15027 2179 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 PCM1Q15154 2024 aa1.39□□□□□ -2.19
CD44-212ENST00000524922 ZNF638Q14966 1978 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 TMEM131Q92545 1883 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 IGHV4-4A0A075B6R2 117 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 ILVBLA1L0T0 632 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 RGSL1A5PLK6 1076 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 A6NCN8 305 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TLCD2A6NGC4 264 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 NPIPB15A6NHN6 443 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 SRRM5B3KS81 715 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 EIF3CLB5ME19 914 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 K7ENM7 598 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CACNB4O00305 520 aaPredicted RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 MAP2K7O14733 419 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 B4GAT1O43505 415 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 CREB3O43889 395 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 GPR137BO60478 399 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SNAP91O60641 907 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 PFKFB2O60825 505 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 SDC3O75056 442 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TBCAO75347 108 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 TRMUO75648 421 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 NEBLO76041 1014 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 TM7SF2O76062 418 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 GFPT2O94808 682 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 DUS4LO95620 317 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 POP4O95707 220 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 ASS1P00966 412 aaKnown RBP1.38□□□□□ -2.19
CD44-212ENST00000524922 TNFP01375 233 aa1.38□□□□□ -2.19
CD44-212ENST00000524922 APOEP02649 317 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms