RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 COL26A1Q96A83 441 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 OR2M2Q96R28 347 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SIGLEC11Q96RL6 698 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 RIOK2Q9BVS4 552 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 TTTY10Q9BZA0 68 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 EGLN3Q9H6Z9 239 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 METTL17Q9H7H0 456 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 BRF2Q9HAW0 419 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 MED11Q9P086 117 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 PLEKHB1Q9UF11 243 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 MLXQ9UH92 298 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 FAM86C2PA6NEL3 165 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 CDK2AP1O14519 115 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SOCS5O75159 536 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 TP53P04637 393 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 PSMA6P60900 246 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF33BQ06732 778 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 EIF4EBP2Q13542 120 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ELOAQ14241 798 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF385BQ569K4 471 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 RAET1GQ6H3X3 334 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 PYHIN1Q6K0P9 492 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 VN1R5Q7Z5H4 357 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ADGRF3Q8IZF5 1079 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 LMNTD1Q8N9Z9 388 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ZBTB44Q8NCP5 570 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 FBXO22Q8NEZ5 403 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 OR4C15Q8NGM1 316 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 TNFAIP8L1Q8WVP5 186 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ASB12Q8WXK4 309 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 BRI3BPQ8WY22 251 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 NEIL2Q969S2 332 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SGTBQ96EQ0 304 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SORBS1Q9BX66 1292 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 POLDIP3Q9BY77 421 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 EMC7Q9NPA0 242 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 KPNA3O00505 521 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 MT-ND4P03905 459 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 HMGN1P05114 100 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ALPPL2P10696 532 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 KELP23276 732 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 ACVR1BP36896 505 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SRP9P49458 86 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 BLVRAP53004 296 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 AP3S2P59780 193 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 TBPL1P62380 186 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 LASP1Q14847 261 aaKnown RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 PGBD2Q6P3X8 592 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 FAM198BQ6UWH4 519 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 WASH2PQ6VEQ5 465 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 LRRC28Q86X40 367 aaPredicted RBP8.55□□□□□ -1.04
CSMD1-212ENST00000523387 RAB42Q8N4Z0 105 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 HORMAD2Q8N7B1 307 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 OR4M1Q8NGD0 313 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 FAIM2Q9BWQ8 316 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SLC6A16Q9GZN6 736 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 OR10A4Q9H209 315 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SPNS1Q9H2V7 528 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 NEUROD4Q9HD90 331 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 NANSQ9NR45 359 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 SPG21Q9NZD8 308 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 PTTG3PQ9NZH4 202 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 DOCK1Q14185 1865 aa8.55□□□□□ -1.04
CSMD1-212ENST00000523387 YY2O15391 372 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 KLKB1P03952 638 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 TCRBP04435 133 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 MRPL3P09001 348 aaKnown RBP8.54□□□□□ -1.04
CSMD1-212ENST00000523387 ELK1P19419 428 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 SLC1A3P43003 542 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 PFN3P60673 137 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 BTG1P62324 171 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 AANATQ16613 207 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF311Q5JNZ3 666 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 C3P1Q6ZMU1 363 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 GNPDA2Q8TDQ7 276 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 SLC38A5Q8WUX1 472 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 GIMAP1Q8WWP7 306 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 ECHDC3Q96DC8 303 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 RNF170Q96K19 258 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 MSLNLQ96KJ4 702 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 CAMK1GQ96NX5 476 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 PKMYT1Q99640 499 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 NDC1Q9BTX1 674 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 GSX2Q9BZM3 304 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 KATNBL1Q9H079 304 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 ARL6Q9H0F7 186 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 COPZ2Q9P299 210 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 CFAP97Q9P2B7 532 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 TMEM5Q9Y2B1 443 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 SIP14410 1827 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 TRDV1A0A1B0GX56 115 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 MYADML2A6NDP7 307 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 ZNF840PA6NDX5 716 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 DUSP11O75319 330 aaKnown RBP8.54□□□□□ -1.04
CSMD1-212ENST00000523387 ETHE1O95571 254 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 POP4O95707 220 aaKnown RBP8.54□□□□□ -1.04
CSMD1-212ENST00000523387 LGI1O95970 557 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 IGHA2P01877 340 aa8.54□□□□□ -1.04
CSMD1-212ENST00000523387 TFP02787 698 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms