RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 PTGDSP41222 190 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 STARP49675 285 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 RPP38P78345 283 aaKnown RBP14.06□□□□□ -0.16
MRPS28-209ENST00000522987 PLCXD2Q0VAA5 305 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 PRICKLE4Q2TBC4 344 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 TRMT12Q53H54 448 aaKnown RBP14.06□□□□□ -0.16
MRPS28-209ENST00000522987 TCHHL1Q5QJ38 904 aaPredicted RBP14.06□□□□□ -0.16
MRPS28-209ENST00000522987 MILR1Q7Z6M3 343 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 PM20D2Q8IYS1 436 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 GCNT2Q8N0V5 402 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 METTL4Q8N3J2 472 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 OR52R1Q8NGF1 315 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 HGDQ93099 445 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 KLHL29Q96CT2 875 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 TMEM41AQ96HV5 264 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 TUBA1CQ9BQE3 449 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 LRRC1Q9BTT6 524 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 ELOVL6Q9H5J4 265 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 PFDN4Q9NQP4 134 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 ZNF629Q9UEG4 869 aaPredicted RBP14.06□□□□□ -0.16
MRPS28-209ENST00000522987 PLLPQ9Y342 182 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 PCDHA9Q9Y5H5 950 aa14.06□□□□□ -0.16
MRPS28-209ENST00000522987 C17orf51A8MQB3 221 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 H0Y3Z8 333 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 SMIM24O75264 130 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 UGT2B11O75310 529 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 CBX7O95931 251 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 CYP4B1P13584 511 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 PCSK2P16519 638 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 HOXB4P17483 251 aaPredicted RBP14.05□□□□□ -0.16
MRPS28-209ENST00000522987 ADAM8P78325 824 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 MGAT2Q10469 447 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 KEAP1Q14145 624 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 RCAN2Q14206 197 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 TEX35Q5T0J7 233 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 OR5M10Q6IEU7 315 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 C8orf74Q6P047 294 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 SLC48A1Q6P1K1 146 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 LETMD1Q6P1Q0 360 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 PAMR1Q6UXH9 720 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 PAGE2Q7Z2X7 111 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 OR7G1Q8NGA0 311 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 OR14L1PQ8NHC6 308 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 SELENOMQ8WWX9 145 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 INTS12Q96CB8 462 aaKnown RBP14.05□□□□□ -0.16
MRPS28-209ENST00000522987 SMR3AQ99954 134 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 ZDHHC18Q9NUE0 388 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 AHSPQ9NZD4 102 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 CES1P1Q9UKY3 287 aa14.05□□□□□ -0.16
MRPS28-209ENST00000522987 NIPBLQ6KC79 2804 aaeCLIP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 MBD3L4A6NDZ8 208 aaPredicted RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 MBD3L3A6NE82 208 aaPredicted RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 GOLGA6L10A6NI86 522 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 MBD3L5A6NJ08 208 aaPredicted RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 CD8B2A6NJW9 211 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 POC1B-GALNT4F8VUJ3 575 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 SNPHO15079 494 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 REM1O75628 298 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 OR4F21O95013 312 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 ESRRBO95718 433 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 EPXP11678 715 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 PHBP35232 272 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 CPA2P48052 419 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 GALNT1Q10472 559 aaPredicted RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 FBXL19-AS1Q494R0 122 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 CCDC91Q7Z6B0 441 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 TRIM42Q8IWZ5 723 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 C1orf52Q8N6N3 182 aaKnown RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 WFDC11Q8NEX6 87 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 MBD3L2Q8NHZ7 208 aaPredicted RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 KAT2AQ92830 837 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 TMBIM1Q969X1 311 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 TM4SF18Q96CE8 201 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 LCORQ96JN0 433 aaPredicted RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 SECISBP2Q96T21 854 aaKnown RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 YIPF4Q9BSR8 244 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 NTMT1Q9BV86 223 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 RBM24Q9BX46 236 aaKnown RBP14.04□□□□□ -0.16
MRPS28-209ENST00000522987 ACSS3Q9H6R3 686 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 PSD3Q9NYI0 1048 aa14.04□□□□□ -0.16
MRPS28-209ENST00000522987 C1orf226A1L170 272 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 PRAMEF25A6NGN4 478 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 CLCA1A8K7I4 914 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 ATE1O95260 518 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 RAF1P04049 648 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 INHBAP08476 426 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 RBP1P09455 135 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 CHN1P15882 459 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 CSNK2A2P19784 350 aaPredicted RBP14.03□□□□□ -0.16
MRPS28-209ENST00000522987 MAP4K2Q12851 820 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 NHSL2Q5HYW2 709 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 NUP54Q7Z3B4 507 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 KIF18BQ86Y91 864 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 WDSUB1Q8N9V3 476 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 TRPC4APQ8TEL6 797 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 EXOSC8Q96B26 276 aaKnown RBP14.03□□□□□ -0.16
MRPS28-209ENST00000522987 CNRIP1Q96F85 164 aaPredicted RBP14.03□□□□□ -0.16
MRPS28-209ENST00000522987 PAFAH2Q99487 392 aa14.03□□□□□ -0.16
MRPS28-209ENST00000522987 CDC42EP4Q9H3Q1 356 aaKnown RBP14.03□□□□□ -0.16
MRPS28-209ENST00000522987 GALNT8Q9NY28 637 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms