RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 TRIM25Q14258 630 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 LASP1Q14847 261 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 TRMT12Q53H54 448 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 COX20Q5RI15 118 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 EXOSC6Q5RKV6 272 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 GCNT6Q5T4J0 391 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 MFSD12Q6NUT3 480 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 FAM199XQ6PEV8 388 aaPredicted RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 TMEM205Q6UW68 189 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 DGAT2L6Q6ZPD8 337 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 ANKRD37Q7Z713 158 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 SLC30A8Q8IWU4 369 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 MICU2Q8IYU8 434 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 NLGN4XQ8N0W4 816 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 C10orf111Q8N326 155 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 RNF148Q8N7C7 305 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 NLGN4YQ8NFZ3 816 aaPredicted RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 OR7G1Q8NGA0 311 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 OR2Y1Q8NGV0 311 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 CT55Q8WUE5 264 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 METTL21AQ8WXB1 218 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 DAZLQ92904 295 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 PPWD1Q96BP3 646 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 SLC46A1Q96NT5 459 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 NRSN2Q9GZP1 204 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 SERHL2Q9H4I8 314 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 TMEM38AQ9H6F2 299 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 PNO1Q9NRX1 252 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 FAF1Q9UNN5 650 aaPredicted RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 POMPQ9Y244 141 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 SNX13Q9Y5W8 968 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 DSPP15924 2871 aaKnown RBP12.18□□□□□ -0.46
CPNE3-205ENST00000522240 SCN2AQ99250 2005 aa12.18□□□□□ -0.46
CPNE3-205ENST00000522240 NUP214P35658 2090 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ASPMQ8IZT6 3477 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 SAGE2PA6NJ88 616 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 TTC36A6NLP5 189 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 C17orf105B2RV13 164 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 RAD1O60671 282 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 KLF7O75840 302 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 SOX30O94993 753 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 STAMBPO95630 424 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 AGR2O95994 175 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 IGHEP01854 428 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 C1QCP02747 245 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ARAFP10398 606 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 TCN1P20061 433 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 S1PR1P21453 382 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 PCGF2P35227 344 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 FOLR3P41439 243 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 CRATP43155 626 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 OR4D2P58180 307 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 DSTNP60981 165 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ZNF267Q14586 743 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 VMACQ2NL98 169 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 LCE2DQ5TA82 110 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 C1orf146Q5VVC0 180 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 LCN8Q6JVE9 175 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 CDC73Q6P1J9 531 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 SHISA6Q6ZSJ9 500 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 LANCL3Q6ZV70 420 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 IFNEQ86WN2 208 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 PTOV1Q86YD1 416 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 TMEM151BQ8IW70 566 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ZZZ3Q8IYH5 903 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 METTL25Q8N6Q8 603 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ENDOVQ8N8Q3 282 aaKnown RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 CDRT4Q8N9R6 151 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 C11orf65Q8NCR3 313 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 FAM156AQ8NDB6 213 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 MORN4Q8NDC4 146 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 PTPMT1Q8WUK0 201 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 JADE3Q92613 823 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 HOXB13Q92826 284 aaPredicted RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 MAGED4Q96JG8 741 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 CNPPD1Q9BV87 410 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ACTRT3Q9BYD9 372 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 TRIM15Q9C019 465 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 A4GALTQ9NPC4 353 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ASCL3Q9NQ33 180 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 GIN1Q9NXP7 522 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ACTR3BQ9P1U1 418 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 BCAP29Q9UHQ4 241 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ERVK-19Q9WJR5 959 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 PTRH2Q9Y3E5 179 aaKnown RBP12.17□□□□□ -0.46
CPNE3-205ENST00000522240 ZNF451Q9Y4E5 1061 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 CLCA3PQ9Y6N3 262 aa12.17□□□□□ -0.46
CPNE3-205ENST00000522240 LOC102723996A0A087X1L8 192 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 A0A1W2PQ72 361 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 DUXAA6NLW8 204 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 ACOT8O14734 319 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 TERTO14746 1132 aaKnown RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 ARPC2O15144 300 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 SORBS2O94875 1100 aaKnown RBP12.16□□□□□ -0.46
CPNE3-205ENST00000522240 DDAH2O95865 285 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 IGKV3-11P04433 115 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 UMODP07911 640 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 TNNI3P19429 210 aa12.16□□□□□ -0.46
CPNE3-205ENST00000522240 GGT1P19440 569 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms