RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 MARCH4Q9P2E8 410 aaPredicted RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 POLG2Q9UHN1 485 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 FBXO5Q9UKT4 447 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 SARDHQ9UL12 918 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 NDRG2Q9UN36 371 aaKnown RBP3.69□□□□□ -1.82
CLK4-207ENST00000520909 DNAJC16Q9Y2G8 782 aa3.69□□□□□ -1.82
CLK4-207ENST00000520909 MYO10Q9HD67 2058 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 A0A1W2PPM1 405 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 TSPAN11A1L157 253 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 MEIOCA2RUB1 952 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 TMEM202A6NGA9 273 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 FAM90A7PA6NKC0 464 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 FAM90A22PA8MWA6 464 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 FAM90A12PA8MX19 464 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 FAM90A23PA8MXZ1 464 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 GOLGA8RI6L899 631 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 PFDN6O15212 129 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SPAG7O75391 227 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 NDUFS3O75489 264 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A6P19224 532 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A1P22309 533 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A4P22310 534 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 LHCGRP22888 699 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 PSMA3P25788 255 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CNTFP26441 200 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A3P35503 534 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 UGT1A5P35504 534 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 HADHAP40939 763 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 P2RY2P41231 377 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CD151P48509 253 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SPINT3P49223 89 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SERPINB8P50452 374 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SUOXP51687 545 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 STC1P52823 247 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 METAP1P53582 386 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 LIMK2P53671 638 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CSE1LP55060 971 aaKnown RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 RPL24P83731 157 aaKnown RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 CBX1P83916 185 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ACVR1Q04771 509 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CACNG1Q06432 222 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CNTN1Q12860 1018 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 DNAJC3Q13217 504 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ENPP2Q13822 863 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 TMEM187Q14656 261 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 TAF11Q15544 211 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 MLF2Q15773 248 aaPredicted RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 CHRNA6Q15825 494 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CST6Q15828 149 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CDKN3Q16667 212 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ZNF789Q5FWF6 425 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 TNFAIP8L3Q5GJ75 292 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 LRRC66Q68CR7 880 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ZNF776Q68DI1 518 aaPredicted RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 OR7E24Q6IFN5 339 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CNSTQ6PJW8 725 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 AFTPHQ6ULP2 937 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 FAM151BQ6UXP7 276 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 RFLNAQ6ZTI6 216 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ERN2Q76MJ5 926 aaKnown RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 DPPA4Q7L190 304 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 TRMT11Q7Z4G4 463 aaKnown RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 HSD11B1LQ7Z5J1 315 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CACUL1Q86Y37 369 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 CNTN4Q8IWV2 1026 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 PIANPQ8IYJ0 282 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 C4orf33Q8N1A6 199 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SPATA6LQ8N4H0 392 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 HDDC3Q8N4P3 179 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 DCLK2Q8N568 766 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 GPATCH11Q8N954 259 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ANKRD42Q8N9B4 389 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 OR2T3Q8NH03 318 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 RPLP0P6Q8NHW5 317 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 MGARPQ8TDB4 240 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 PEX13Q92968 403 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.68□□□□□ -1.82
CLK4-207ENST00000520909 LINGO1Q96FE5 620 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 MSANTD3Q96H12 275 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 PPP1R16AQ96I34 528 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 VPS39Q96JC1 886 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ELMO2Q96JJ3 720 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SERAC1Q96JX3 654 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 LYSMD1Q96S90 227 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SMC6Q96SB8 1091 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 RBBP8Q99708 897 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 OMDQ99983 421 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 WRAP53Q9BUR4 548 aaKnown RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 RSPH9Q9H1X1 276 aaPredicted RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 RHOJQ9H4E5 214 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 IL26Q9NPH9 171 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 RASSF1Q9NS23 344 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 INTS10Q9NVR2 710 aaKnown RBP3.68□□□□□ -1.82
CLK4-207ENST00000520909 EURLQ9NYK6 297 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 NKIRAS1Q9NYS0 192 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 SENP1Q9P0U3 644 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 ITM2BQ9Y287 266 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 PPIL1Q9Y3C6 166 aa3.68□□□□□ -1.82
CLK4-207ENST00000520909 GLYATL1P3A0A0U1RQE8 302 aa3.67□□□□□ -1.82
CLK4-207ENST00000520909 A0A1W2PQF6 199 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms