RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 ANKRD26Q9UPS8 1709 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 A8MU76 341 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 NPIPB9F8W1W9 429 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 VPS26AO75436 327 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 CEACAM4O75871 244 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 KRT6BP04259 564 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 DPEP1P16444 411 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 CYP2F1P24903 491 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 TMOD1P28289 359 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 KRT6CP48668 564 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 NPY2RP49146 381 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 ABCE1P61221 599 aaKnown RBP6.34□□□□□ -1.39
LSM1-202ENST00000520286 TRA2BP62995 288 aaKnown RBP6.34□□□□□ -1.39
LSM1-202ENST00000520286 CDKL1Q00532 357 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 HSF2Q03933 536 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 CLPPQ16740 277 aaPredicted RBP6.34□□□□□ -1.39
LSM1-202ENST00000520286 SGSM1Q2NKQ1 1148 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 CCDC183Q5T5S1 534 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 DCAF12Q5T6F0 453 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 PWWP2BQ6NUJ5 590 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 MISPQ8IVT2 679 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 MRGPRDQ8TDS7 321 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 TMEM37Q8WXS4 190 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 DTNBP1Q96EV8 351 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 DCTN5Q9BTE1 182 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 PINK1Q9BXM7 581 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 CLEC7AQ9BXN2 247 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 TMOD2Q9NZR1 351 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 ATXN10Q9UBB4 475 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 KLK11Q9UBX7 282 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 CSNK1G3Q9Y6M4 447 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 ZHX2Q9Y6X8 837 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 ABCC6O95255 1503 aa6.34□□□□□ -1.39
LSM1-202ENST00000520286 RTL1A6NKG5 1358 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 NHSQ6T4R5 1651 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 TCHHQ07283 1943 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 HHLA1C9JL84 531 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 LGALS8O00214 317 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 CHADO15335 359 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 KCNAB3O43448 404 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 TLX2O43763 284 aaPredicted RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 TOM1L1O75674 476 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 RRASP10301 218 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 MBL2P11226 248 aaPredicted RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 H2AFXP16104 143 aaPredicted RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 OPRL1P41146 370 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 ELP6Q0PNE2 266 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 RAPSNQ13702 412 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 ARHGAP17Q68EM7 881 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 SLC25A24Q6NUK1 477 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 CWC27Q6UX04 472 aaKnown RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 MCM10Q7L590 875 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 ZER1Q7Z7L7 766 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 CATSPERDQ86XM0 798 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 OR4N5Q8IXE1 308 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 GMCL1P1Q8NEA9 526 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 DDHD1Q8NEL9 900 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 RDH11Q8TC12 318 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 CHPT1Q8WUD6 406 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 GMPPAQ96IJ6 420 aaPredicted RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 F2RL3Q96RI0 385 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 FICDQ9BVA6 458 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 UBXN6Q9BZV1 441 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 FAM124BQ9H5Z6 455 aaPredicted RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 ZNF446Q9NWS9 450 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 TEX10Q9NXF1 929 aaPredicted RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 KLHL8Q9P2G9 620 aaPredicted RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 MIOXQ9UGB7 285 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 ICAM5Q9UMF0 924 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 WIPI2Q9Y4P8 454 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.33□□□□□ -1.4
LSM1-202ENST00000520286 C10orf71Q711Q0 1435 aa6.33□□□□□ -1.4
LSM1-202ENST00000520286 OR5H15A6NDH6 313 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 ERVV-2B6SEH9 535 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 SH2D1BO14796 132 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 LANCL1O43813 399 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 GP9P14770 177 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 MX1P20591 662 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 ANOS1P23352 680 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 IL4RP24394 825 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 EDNRAP25101 427 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 PTPN4P29074 926 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 RPL27P61353 136 aaKnown RBP6.32□□□□□ -1.4
LSM1-202ENST00000520286 RPS4XP62701 263 aaKnown RBP6.32□□□□□ -1.4
LSM1-202ENST00000520286 GNB1P62873 340 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 DHODHQ02127 395 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 RBBP4Q09028 425 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 KLF5Q13887 457 aaPredicted RBP6.32□□□□□ -1.4
LSM1-202ENST00000520286 GCKRQ14397 625 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 ZNF876PQ49A33 203 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 DDI2Q5TDH0 399 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 BHLHB9Q6PI77 547 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 ASRGL1Q7L266 308 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 ZNF573Q86YE8 665 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 MLKLQ8NB16 471 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 RELL2Q8NC24 303 aaPredicted RBP6.32□□□□□ -1.4
LSM1-202ENST00000520286 RAB7BQ96AH8 199 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 ZNF501Q96CX3 271 aaPredicted RBP6.32□□□□□ -1.4
LSM1-202ENST00000520286 ACCSQ96QU6 501 aa6.32□□□□□ -1.4
LSM1-202ENST00000520286 MYCBPQ99417 103 aaPredicted RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms